RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.272e-13■■□□□ 14.2
APOB-202ENST00000399256 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
APOB-202ENST00000399256 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
APOB-202ENST00000399256 PTGS1P23219 599 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
APOB-202ENST00000399256 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CAMK4Q16566 473 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 TPM3P06753 285 aa16.7■□□□□ 0.26
APOB-202ENST00000399256 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
APOB-202ENST00000399256 ACEP12821 1306 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 LUZP1Q86V48 1076 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
APOB-202ENST00000399256 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 OVOS2A0A0J9YW53 1432 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 OVOS2Q6IE36 1432 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
APOB-202ENST00000399256 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 ANKRD7Q92527 254 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 IGSF3O75054 1194 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
APOB-202ENST00000399256 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 KCNA6P17658 529 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PTH1RQ03431 593 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
APOB-202ENST00000399256 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
APOB-202ENST00000399256 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
APOB-202ENST00000399256 LIG1P18858 919 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 LRMPQ12912 555 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
APOB-202ENST00000399256 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
APOB-202ENST00000399256 TYRO3Q06418 890 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 MAP3K11Q16584 847 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
APOB-202ENST00000399256 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
APOB-202ENST00000399256 ME3Q16798 604 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 EYA1Q99502 592 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 POLA2Q14181 598 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
APOB-202ENST00000399256 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
APOB-202ENST00000399256 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
APOB-202ENST00000399256 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
APOB-202ENST00000399256 KRT85P78386 507 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
APOB-202ENST00000399256 NWD1Q149M9 1564 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
APOB-202ENST00000399256 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 AMPHP49418 695 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 HSPA2P54652 639 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
APOB-202ENST00000399256 TRIM5Q9C035 493 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 USP6P35125 1406 aa16.62■□□□□ 0.25
APOB-202ENST00000399256 KIF20AO95235 890 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
APOB-202ENST00000399256 TNNT1P13805 278 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
APOB-202ENST00000399256 KDRP35968 1356 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
APOB-202ENST00000399256 KCNJ4P48050 445 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms