RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 USP44Q9H0E7 712 aa12.25□□□□□ -0.45
FAM3B-202ENST00000398646 HMMRO75330 724 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
FAM3B-202ENST00000398646 MYD88Q99836 296 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
FAM3B-202ENST00000398646 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
FAM3B-202ENST00000398646 THSD7AQ9UPZ6 1657 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
FAM3B-202ENST00000398646 KCNQ2O43526 872 aa12.23□□□□□ -0.45
FAM3B-202ENST00000398646 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
FAM3B-202ENST00000398646 ABCB7O75027 752 aa12.23□□□□□ -0.45
FAM3B-202ENST00000398646 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
FAM3B-202ENST00000398646 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
FAM3B-202ENST00000398646 ATP8B2P98198 1209 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 TTLL7Q6ZT98 887 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 SLC4A9Q96Q91 983 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
FAM3B-202ENST00000398646 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
FAM3B-202ENST00000398646 IGKV5-2P06315 115 aa12.21□□□□□ -0.45
FAM3B-202ENST00000398646 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
FAM3B-202ENST00000398646 CWF19L2Q2TBE0 894 aaKnown RBP12.21□□□□□ -0.45
FAM3B-202ENST00000398646 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
FAM3B-202ENST00000398646 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.45
FAM3B-202ENST00000398646 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
FAM3B-202ENST00000398646 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
FAM3B-202ENST00000398646 NBPF7P0C2Y1 421 aaPredicted RBP12.2□□□□□ -0.46
FAM3B-202ENST00000398646 SIK1P57059 783 aa12.2□□□□□ -0.46
FAM3B-202ENST00000398646 NUCB1Q02818 461 aa12.2□□□□□ -0.46
FAM3B-202ENST00000398646 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
FAM3B-202ENST00000398646 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
FAM3B-202ENST00000398646 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
FAM3B-202ENST00000398646 GRM8O00222 908 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 GCKRQ14397 625 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 ARXQ96QS3 562 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 ZBTB3Q9H5J0 574 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 TJP1Q07157 1748 aa12.19□□□□□ -0.46
FAM3B-202ENST00000398646 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
FAM3B-202ENST00000398646 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
FAM3B-202ENST00000398646 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
FAM3B-202ENST00000398646 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
FAM3B-202ENST00000398646 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
FAM3B-202ENST00000398646 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
FAM3B-202ENST00000398646 UTYO14607 1347 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 PDE4AP27815 886 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
FAM3B-202ENST00000398646 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
FAM3B-202ENST00000398646 ITPK1Q13572 414 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 SUCLG2Q96I99 432 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
FAM3B-202ENST00000398646 A0A087WZG4 1122 aa12.16□□□□□ -0.46
FAM3B-202ENST00000398646 CRKLP46109 303 aaKnown RBP12.16□□□□□ -0.46
FAM3B-202ENST00000398646 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
FAM3B-202ENST00000398646 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
FAM3B-202ENST00000398646 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
FAM3B-202ENST00000398646 MAP3K15Q6ZN16 1313 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 NUP188Q5SRE5 1749 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 APBB1O00213 710 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 SRGAP3O43295 1099 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 TCIRG1Q13488 830 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 HSP90AB3PQ58FF7 597 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
FAM3B-202ENST00000398646 PTF1AQ7RTS3 328 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
FAM3B-202ENST00000398646 AFDNP55196 1824 aaKnown RBP12.15□□□□□ -0.46
FAM3B-202ENST00000398646 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
FAM3B-202ENST00000398646 MTX1Q13505 466 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
FAM3B-202ENST00000398646 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
FAM3B-202ENST00000398646 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
FAM3B-202ENST00000398646 BTAF1O14981 1849 aa12.14□□□□□ -0.47
FAM3B-202ENST00000398646 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 H7C1W4 665 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 TBC1D2BQ9UPU7 963 aa12.13□□□□□ -0.47
FAM3B-202ENST00000398646 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
FAM3B-202ENST00000398646 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms