RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
MBD1-208ENST00000398493 C4BP0C0L5 1744 aa23■■□□□ 1.27
MBD1-208ENST00000398493 RC3H1Q5TC82 1133 aaKnown RBP23■■□□□ 1.27
MBD1-208ENST00000398493 STK31Q9BXU1 1019 aa23■■□□□ 1.27
MBD1-208ENST00000398493 CHMP4AQ9BY43 222 aa23■■□□□ 1.27
MBD1-208ENST00000398493 GNPATO15228 680 aa22.99■■□□□ 1.27
MBD1-208ENST00000398493 SLC4A2P04920 1241 aa22.99■■□□□ 1.27
MBD1-208ENST00000398493 ERICH6Q7L0X2 663 aa22.99■■□□□ 1.27
MBD1-208ENST00000398493 AK7Q96M32 723 aa22.99■■□□□ 1.27
MBD1-208ENST00000398493 MSH5O43196 834 aa22.98■■□□□ 1.27
MBD1-208ENST00000398493 SLC15A2Q16348 729 aa22.98■■□□□ 1.27
MBD1-208ENST00000398493 CCDC30Q5VVM6 783 aa22.98■■□□□ 1.27
MBD1-208ENST00000398493 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
MBD1-208ENST00000398493 IPO9Q96P70 1041 aaKnown RBP22.98■■□□□ 1.27
MBD1-208ENST00000398493 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
MBD1-208ENST00000398493 SMC5Q8IY18 1101 aa22.98■■□□□ 1.27
MBD1-208ENST00000398493 MYL6BP14649 208 aa22.97■■□□□ 1.27
MBD1-208ENST00000398493 C8orf34Q49A92 452 aa22.97■■□□□ 1.27
MBD1-208ENST00000398493 LRP10Q7Z4F1 713 aa22.97■■□□□ 1.27
MBD1-208ENST00000398493 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
MBD1-208ENST00000398493 TFCP2L1Q9NZI6 479 aa22.96■■□□□ 1.27
MBD1-208ENST00000398493 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
MBD1-208ENST00000398493 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
MBD1-208ENST00000398493 PHF14O94880 888 aa22.96■■□□□ 1.27
MBD1-208ENST00000398493 STK32BQ9NY57 414 aa22.96■■□□□ 1.27
MBD1-208ENST00000398493 EIF5P55010 431 aaKnown RBP22.95■■□□□ 1.26
MBD1-208ENST00000398493 ZNF330Q9Y3S2 320 aaPredicted RBP22.95■■□□□ 1.26
MBD1-208ENST00000398493 RTCBQ9Y3I0 505 aaKnown RBP22.94■■□□□ 1.26
MBD1-208ENST00000398493 GCC1Q96CN9 775 aa22.94■■□□□ 1.26
MBD1-208ENST00000398493 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
MBD1-208ENST00000398493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.93■■□□□ 1.26
MBD1-208ENST00000398493 IL6STP40189 918 aaPredicted RBP22.93■■□□□ 1.26
MBD1-208ENST00000398493 PDGFDQ9GZP0 370 aaPredicted RBP22.93■■□□□ 1.26
MBD1-208ENST00000398493 DBF4Q9UBU7 674 aaPredicted RBP22.93■■□□□ 1.26
MBD1-208ENST00000398493 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
MBD1-208ENST00000398493 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
MBD1-208ENST00000398493 PHAXQ9H814 394 aaKnown RBP22.92■■□□□ 1.26
MBD1-208ENST00000398493 ERBB4Q15303 1308 aa22.92■■□□□ 1.26
MBD1-208ENST00000398493 HMGB2P26583 209 aaKnown RBP22.91■■□□□ 1.26
MBD1-208ENST00000398493 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
MBD1-208ENST00000398493 G2E3Q7L622 706 aa22.91■■□□□ 1.26
MBD1-208ENST00000398493 COL23A1Q86Y22 540 aaPredicted RBP22.91■■□□□ 1.26
MBD1-208ENST00000398493 ZBTB47Q9UFB7 747 aaPredicted RBP22.91■■□□□ 1.26
MBD1-208ENST00000398493 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
MBD1-208ENST00000398493 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
MBD1-208ENST00000398493 UBR3Q6ZT12 1888 aa22.9■■□□□ 1.26
MBD1-208ENST00000398493 SSFA2P28290 1259 aa22.89■■□□□ 1.26
MBD1-208ENST00000398493 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.26
MBD1-208ENST00000398493 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.26
MBD1-208ENST00000398493 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.26
MBD1-208ENST00000398493 COL15A1P39059 1388 aa22.89■■□□□ 1.26
MBD1-208ENST00000398493 PSDA5PKW4 1024 aaPredicted RBP22.89■■□□□ 1.25
MBD1-208ENST00000398493 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.25
MBD1-208ENST00000398493 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
MBD1-208ENST00000398493 TUBGCP6Q96RT7 1819 aa22.88■■□□□ 1.25
MBD1-208ENST00000398493 NUCB1Q02818 461 aa22.88■■□□□ 1.25
MBD1-208ENST00000398493 XAGE3Q8WTP9 111 aa22.88■■□□□ 1.25
MBD1-208ENST00000398493 NOP58Q9Y2X3 529 aaKnown RBP22.88■■□□□ 1.25
MBD1-208ENST00000398493 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
MBD1-208ENST00000398493 ARXQ96QS3 562 aa22.87■■□□□ 1.25
MBD1-208ENST00000398493 HYPKQ9NX55 129 aa22.87■■□□□ 1.25
MBD1-208ENST00000398493 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
MBD1-208ENST00000398493 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
MBD1-208ENST00000398493 C1orf115Q9H7X2 142 aa22.87■■□□□ 1.25
MBD1-208ENST00000398493 ADRA2BP18089 450 aa22.85■■□□□ 1.25
MBD1-208ENST00000398493 FLIIQ13045 1269 aa22.85■■□□□ 1.25
MBD1-208ENST00000398493 CHD1LQ86WJ1 897 aa22.85■■□□□ 1.25
MBD1-208ENST00000398493 DZIP3Q86Y13 1208 aaKnown RBP22.85■■□□□ 1.25
MBD1-208ENST00000398493 RFC4P35249 363 aa22.84■■□□□ 1.25
MBD1-208ENST00000398493 FKBP5Q13451 457 aaPredicted RBP22.83■■□□□ 1.25
MBD1-208ENST00000398493 USPL1Q5W0Q7 1092 aa22.83■■□□□ 1.25
MBD1-208ENST00000398493 SLC4A10Q6U841 1118 aa22.83■■□□□ 1.25
MBD1-208ENST00000398493 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.25
MBD1-208ENST00000398493 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.25
MBD1-208ENST00000398493 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.24
MBD1-208ENST00000398493 CAMTA2O94983 1202 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 HLFQ16534 295 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 ANKRD45Q5TZF3 282 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 ZBTB3Q9H5J0 574 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 NARFQ9UHQ1 456 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
MBD1-208ENST00000398493 A0A087WZG4 1122 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 SIRT2Q8IXJ6 389 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 ANKRD44Q8N8A2 993 aa22.82■■□□□ 1.24
MBD1-208ENST00000398493 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
MBD1-208ENST00000398493 MAP3K15Q6ZN16 1313 aa22.8■■□□□ 1.24
MBD1-208ENST00000398493 ZPR1O75312 459 aa22.8■■□□□ 1.24
MBD1-208ENST00000398493 GYS1P13807 737 aa22.8■■□□□ 1.24
MBD1-208ENST00000398493 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
MBD1-208ENST00000398493 LNPKQ9C0E8 428 aa22.8■■□□□ 1.24
MBD1-208ENST00000398493 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
MBD1-208ENST00000398493 F6X3S4 739 aa22.79■■□□□ 1.24
MBD1-208ENST00000398493 HMMRO75330 724 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 DCTPP1Q9H773 170 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 QSER1Q2KHR3 1735 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 GNAI3P08754 354 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms