RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
PUM3-202ENST00000397885 CERS3Q8IU89 383 aa13.69□□□□□ -0.22
PUM3-202ENST00000397885 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
PUM3-202ENST00000397885 C16orf45Q96MC5 204 aaPredicted RBP13.69□□□□□ -0.22
PUM3-202ENST00000397885 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
PUM3-202ENST00000397885 RSPH14Q9UHP6 348 aa13.69□□□□□ -0.22
PUM3-202ENST00000397885 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
PUM3-202ENST00000397885 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 AP5Z1O43299 807 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
PUM3-202ENST00000397885 CDK19Q9BWU1 502 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
PUM3-202ENST00000397885 SOX12O15370 315 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 CEP135Q66GS9 1140 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 IFT57Q9NWB7 429 aa13.68□□□□□ -0.22
PUM3-202ENST00000397885 TRPM3Q9HCF6 1732 aaPredicted RBP13.68□□□□□ -0.22
PUM3-202ENST00000397885 ERC2O15083 957 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 DHX16O60231 1041 aaKnown RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 PTGS1P23219 599 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 ANAPC15P60006 121 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
PUM3-202ENST00000397885 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
PUM3-202ENST00000397885 ATP7BP35670 1465 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 GTF2A1P52655 376 aaPredicted RBP13.66□□□□□ -0.22
PUM3-202ENST00000397885 TPM4P67936 248 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
PUM3-202ENST00000397885 ICE2Q659A1 982 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■□ 19.4
PUM3-202ENST00000397885 CWC15Q9P013 229 aaKnown RBP13.66□□□□□ -0.22
PUM3-202ENST00000397885 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 ATRNO75882 1429 aa13.66□□□□□ -0.22
PUM3-202ENST00000397885 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
PUM3-202ENST00000397885 NEMFO60524 1076 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 CASQ1P31415 396 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 NEK4P51957 841 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 MYCBPQ99417 103 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 H2AFXP16104 143 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 V9GYY5 206 aaPredicted RBP13.65□□□□□ -0.22
PUM3-202ENST00000397885 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
PUM3-202ENST00000397885 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
PUM3-202ENST00000397885 GPS2Q13227 327 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 BCL9LQ86UU0 1499 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
PUM3-202ENST00000397885 SLU7O95391 586 aaKnown RBP13.64□□□□□ -0.23
PUM3-202ENST00000397885 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 KCND1Q9NSA2 647 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 RGS12O14924 1447 aa13.64□□□□□ -0.23
PUM3-202ENST00000397885 SDSP20132 328 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 GOLGA6L1Q8N7Z2 621 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 ZNF446Q9NWS9 450 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
PUM3-202ENST00000397885 SLIT2O94813 1529 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 PTPRCP08575 1304 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 MCCP23508 829 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
PUM3-202ENST00000397885 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 ABCC4O15439 1325 aa13.63□□□□□ -0.23
PUM3-202ENST00000397885 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 CDC25BP30305 580 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 ELP1O95163 1332 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 MYO1CO00159 1063 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 PLA2G4DQ86XP0 818 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 NWD2Q9ULI1 1742 aa13.62□□□□□ -0.23
PUM3-202ENST00000397885 EPB41L2O43491 1005 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms