RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 C21orf2O43822 256 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 PRELPP51888 382 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 FSTL1Q12841 308 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 MIS18AQ9NYP9 233 aa18.9■□□□□ 0.62
SNRNP25-203ENST00000397876 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
SNRNP25-203ENST00000397876 CCDC88AQ3V6T2 1871 aa18.89■□□□□ 0.61
SNRNP25-203ENST00000397876 GLTPD2A6NH11 291 aa18.89■□□□□ 0.61
SNRNP25-203ENST00000397876 PLEKHF1Q96S99 279 aa18.89■□□□□ 0.61
SNRNP25-203ENST00000397876 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 FER1L6Q2WGJ9 1857 aa18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 SRGNP10124 158 aa18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 MASTLQ96GX5 879 aa18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNRNP25-203ENST00000397876 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
SNRNP25-203ENST00000397876 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
SNRNP25-203ENST00000397876 LTBP3Q9NS15 1303 aa18.87■□□□□ 0.61
SNRNP25-203ENST00000397876 TPTE2Q6XPS3 522 aa18.86■□□□□ 0.61
SNRNP25-203ENST00000397876 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
SNRNP25-203ENST00000397876 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
SNRNP25-203ENST00000397876 VEGFAP15692 232 aaPredicted RBP18.85■□□□□ 0.61
SNRNP25-203ENST00000397876 RALBP1Q15311 655 aa18.85■□□□□ 0.61
SNRNP25-203ENST00000397876 ERFEQ4G0M1 354 aa18.85■□□□□ 0.61
SNRNP25-203ENST00000397876 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
SNRNP25-203ENST00000397876 DICER1Q9UPY3 1922 aaKnown RBP18.84■□□□□ 0.61
SNRNP25-203ENST00000397876 NPR1P16066 1061 aa18.84■□□□□ 0.61
SNRNP25-203ENST00000397876 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
SNRNP25-203ENST00000397876 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
SNRNP25-203ENST00000397876 FAM177BA6PVY3 158 aa18.83■□□□□ 0.6
SNRNP25-203ENST00000397876 HLFQ16534 295 aa18.83■□□□□ 0.6
SNRNP25-203ENST00000397876 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
SNRNP25-203ENST00000397876 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
SNRNP25-203ENST00000397876 GTF2E1P29083 439 aaPredicted RBP18.82■□□□□ 0.6
SNRNP25-203ENST00000397876 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 DNAJC5GQ8N7S2 189 aa18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 NYXQ9GZU5 481 aa18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
SNRNP25-203ENST00000397876 ERBB4Q15303 1308 aa18.8■□□□□ 0.6
SNRNP25-203ENST00000397876 MYL6BP14649 208 aa18.8■□□□□ 0.6
SNRNP25-203ENST00000397876 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
SNRNP25-203ENST00000397876 RIPK4P57078 832 aa18.79■□□□□ 0.6
SNRNP25-203ENST00000397876 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
SNRNP25-203ENST00000397876 NUP98P52948 1817 aa18.79■□□□□ 0.6
SNRNP25-203ENST00000397876 HTRA3P83110 453 aa18.78■□□□□ 0.6
SNRNP25-203ENST00000397876 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
SNRNP25-203ENST00000397876 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
SNRNP25-203ENST00000397876 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
SNRNP25-203ENST00000397876 IBTKQ9P2D0 1353 aaPredicted RBP18.78■□□□□ 0.6
SNRNP25-203ENST00000397876 MYBBP1AQ9BQG0 1328 aaKnown RBP18.77■□□□□ 0.6
SNRNP25-203ENST00000397876 ALDH1B1P30837 517 aa18.77■□□□□ 0.6
SNRNP25-203ENST00000397876 KLRG1Q96E93 195 aa18.77■□□□□ 0.6
SNRNP25-203ENST00000397876 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
SNRNP25-203ENST00000397876 POTECB2RU33 542 aa18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 IFFO2Q5TF58 517 aa18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 NUTM1Q86Y26 1132 aa18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
SNRNP25-203ENST00000397876 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
SNRNP25-203ENST00000397876 GPTP24298 496 aa18.75■□□□□ 0.59
SNRNP25-203ENST00000397876 TMPOP42166 694 aaKnown RBP18.75■□□□□ 0.59
SNRNP25-203ENST00000397876 DDNO94850 711 aaPredicted RBP18.74■□□□□ 0.59
SNRNP25-203ENST00000397876 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
SNRNP25-203ENST00000397876 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
SNRNP25-203ENST00000397876 EIF2S2P20042 333 aaKnown RBP18.73■□□□□ 0.59
SNRNP25-203ENST00000397876 GIGYF2Q6Y7W6 1299 aaKnown RBP18.73■□□□□ 0.59
SNRNP25-203ENST00000397876 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
SNRNP25-203ENST00000397876 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
SNRNP25-203ENST00000397876 IQCA1LA6NCM1 817 aa18.72■□□□□ 0.59
SNRNP25-203ENST00000397876 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNRNP25-203ENST00000397876 OLFM4Q6UX06 510 aa18.72■□□□□ 0.59
SNRNP25-203ENST00000397876 ZNF34Q8IZ26 560 aa18.72■□□□□ 0.59
SNRNP25-203ENST00000397876 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
SNRNP25-203ENST00000397876 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
SNRNP25-203ENST00000397876 PPP1R42Q7Z4L9 355 aa18.71■□□□□ 0.59
SNRNP25-203ENST00000397876 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
SNRNP25-203ENST00000397876 JMYQ8N9B5 988 aa18.71■□□□□ 0.59
SNRNP25-203ENST00000397876 NTSR2O95665 410 aa18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 CC2D2BQ6DHV5 1058 aa18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 CHADLQ6NUI6 762 aa18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 L3MBTL3Q96JM7 780 aaPredicted RBP18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 SCN4AP35499 1836 aa18.7■□□□□ 0.58
SNRNP25-203ENST00000397876 SNED1Q8TER0 1413 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 HOXA10P31260 410 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms