RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PSMA5P28066 241 aa9.98□□□□□ -0.81
PTPRD-204ENST00000397606 ATP8B2P98198 1209 aa9.98□□□□□ -0.81
PTPRD-204ENST00000397606 CWF19L2Q2TBE0 894 aaKnown RBP9.98□□□□□ -0.81
PTPRD-204ENST00000397606 LMBR1LQ6UX01 489 aa9.98□□□□□ -0.81
PTPRD-204ENST00000397606 STK32BQ9NY57 414 aa9.98□□□□□ -0.81
PTPRD-204ENST00000397606 UBR1Q8IWV7 1749 aa9.98□□□□□ -0.81
PTPRD-204ENST00000397606 JARID2Q92833 1246 aaPredicted RBP9.97□□□□□ -0.81
PTPRD-204ENST00000397606 APBA3O96018 575 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 AKAP17AQ02040 695 aaKnown RBP9.97□□□□□ -0.81
PTPRD-204ENST00000397606 NACAP1Q9BZK3 213 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 USP19O94966 1318 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 AFF2P51816 1311 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
PTPRD-204ENST00000397606 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 LRP2BPQ9P2M1 347 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 MST1RQ04912 1400 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 KCNQ3O43525 872 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 RLBP1P12271 317 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 BAG6P46379 1132 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
PTPRD-204ENST00000397606 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.81
PTPRD-204ENST00000397606 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.81
PTPRD-204ENST00000397606 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.81
PTPRD-204ENST00000397606 FAM184AQ8NB25 1140 aa9.96□□□□□ -0.81
PTPRD-204ENST00000397606 RAI14Q9P0K7 980 aa9.96□□□□□ -0.81
PTPRD-204ENST00000397606 IRS4O14654 1257 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-204ENST00000397606 CCDC8Q9H0W5 538 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-204ENST00000397606 ECHDC1Q9NTX5 307 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 ZBTB40Q9NUA8 1239 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 CRB1P82279 1406 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 ZNF521Q96K83 1311 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 USP16Q9Y5T5 823 aa9.96□□□□□ -0.82
PTPRD-204ENST00000397606 LOC102724428A0A0B4J2F2 783 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 CPLX1O14810 134 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 MAP4K4O95819 1239 aaPredicted RBP9.95□□□□□ -0.82
PTPRD-204ENST00000397606 PTMSP20962 102 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 IL15P40933 162 aaPredicted RBP9.95□□□□□ -0.82
PTPRD-204ENST00000397606 SIK1P57059 783 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
PTPRD-204ENST00000397606 PCDHB15Q9Y5E8 787 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 SIGLEC1Q9BZZ2 1709 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 HSPA1LP34931 641 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 NFXL1Q6ZNB6 911 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 TNNQ9UQP3 1299 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 CYP27B1O15528 508 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 ZNF853P0CG23 659 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
PTPRD-204ENST00000397606 BOLA2Q9H3K6 86 aa9.95□□□□□ -0.82
PTPRD-204ENST00000397606 ARHGEF28Q8N1W1 1705 aaKnown RBP9.95□□□□□ -0.82
PTPRD-204ENST00000397606 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
PTPRD-204ENST00000397606 ASAP1Q9ULH1 1129 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 ZNF622Q969S3 477 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRD-204ENST00000397606 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 POLD1P28340 1107 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 CHAF1AQ13111 956 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-204ENST00000397606 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 CTNNA3Q9UI47 895 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-204ENST00000397606 CEP85Q6P2H3 762 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 FLAD1Q8NFF5 587 aa9.94□□□□□ -0.82
PTPRD-204ENST00000397606 IGHDP01880 384 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 MAP3K12Q12852 859 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 H3BQV1 296 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 CSPP1Q1MSJ5 1256 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 CWC27Q6UX04 472 aaKnown RBP9.93□□□□□ -0.82
PTPRD-204ENST00000397606 CNBD1Q8NA66 436 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 ATP6V1DQ9Y5K8 247 aa9.93□□□□□ -0.82
PTPRD-204ENST00000397606 UQCRFS1P1P0C7P4 283 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 NUCB1Q02818 461 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 FAM89AQ96GI7 184 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 GJD4Q96KN9 370 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-204ENST00000397606 USP32Q8NFA0 1604 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 RAD21O60216 631 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 RBM6P78332 1123 aaKnown RBP9.92□□□□□ -0.82
PTPRD-204ENST00000397606 TTF1Q15361 905 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-204ENST00000397606 ATP2B3Q16720 1220 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 AIDAQ96BJ3 306 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 MCM2P49736 904 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 RBM5P52756 815 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRD-204ENST00000397606 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 GCKRQ14397 625 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 RABEP1Q15276 862 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 VPS72Q15906 364 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 PIGBQ92521 554 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 BACH2Q9BYV9 841 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
PTPRD-204ENST00000397606 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 IL6STP40189 918 aaPredicted RBP9.91□□□□□ -0.82
PTPRD-204ENST00000397606 TRIM29Q14134 588 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 BICC1Q9H694 974 aaKnown RBP9.91□□□□□ -0.82
PTPRD-204ENST00000397606 CPDO75976 1380 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 PDE8AO60658 829 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms