RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 DBF4Q9UBU7 674 aaPredicted RBP27.37■■□□□ 1.97
TSPAN4-206ENST00000397408 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
TSPAN4-206ENST00000397408 MAP3K15Q6ZN16 1313 aa27.36■■□□□ 1.97
TSPAN4-206ENST00000397408 EXOSC9Q06265 439 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-206ENST00000397408 CLEC4GQ6UXB4 293 aa27.34■■□□□ 1.97
TSPAN4-206ENST00000397408 XAGE3Q8WTP9 111 aa27.34■■□□□ 1.97
TSPAN4-206ENST00000397408 ZBTB3Q9H5J0 574 aa27.34■■□□□ 1.97
TSPAN4-206ENST00000397408 RGL2O15211 777 aa27.33■■□□□ 1.97
TSPAN4-206ENST00000397408 HLFQ16534 295 aa27.33■■□□□ 1.97
TSPAN4-206ENST00000397408 C10orf71Q711Q0 1435 aa27.33■■□□□ 1.97
TSPAN4-206ENST00000397408 ERVV-1B6SEH8 477 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 E9PSI1 815 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 AIMP1Q12904 312 aaKnown RBP27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 CCDC30Q5VVM6 783 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 COPS6Q7L5N1 327 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 CHMP4AQ9BY43 222 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 CD2APQ9Y5K6 639 aa27.33■■□□□ 1.96
TSPAN4-206ENST00000397408 CARMIL3Q8ND23 1372 aa27.32■■□□□ 1.96
TSPAN4-206ENST00000397408 HNRNPUQ00839 825 aaKnown RBP eCLIP27.32■■□□□ 1.96
TSPAN4-206ENST00000397408 NLGN2Q8NFZ4 835 aa27.32■■□□□ 1.96
TSPAN4-206ENST00000397408 HYPKQ9NX55 129 aa27.32■■□□□ 1.96
TSPAN4-206ENST00000397408 AFDNP55196 1824 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-206ENST00000397408 NRXN2Q9P2S2 1712 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 SERPINB2P05120 415 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 CDCA7LQ96GN5 454 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 SETDB2Q96T68 719 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 NUP98P52948 1817 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 KIF13BQ9NQT8 1826 aa27.3■■□□□ 1.96
TSPAN4-206ENST00000397408 SLFN5Q08AF3 891 aa27.29■■□□□ 1.96
TSPAN4-206ENST00000397408 TCERG1O14776 1098 aaKnown RBP27.28■■□□□ 1.96
TSPAN4-206ENST00000397408 NIP7Q9Y221 180 aaKnown RBP eCLIP27.28■■□□□ 1.96
TSPAN4-206ENST00000397408 ATP10DQ9P241 1426 aa27.27■■□□□ 1.96
TSPAN4-206ENST00000397408 VAMP4O75379 141 aa27.27■■□□□ 1.96
TSPAN4-206ENST00000397408 GIGYF2Q6Y7W6 1299 aaKnown RBP27.27■■□□□ 1.96
TSPAN4-206ENST00000397408 STK31Q9BXU1 1019 aa27.27■■□□□ 1.96
TSPAN4-206ENST00000397408 PHAXQ9H814 394 aaKnown RBP27.25■■□□□ 1.95
TSPAN4-206ENST00000397408 GPTP24298 496 aa27.24■■□□□ 1.95
TSPAN4-206ENST00000397408 PXDNLA1KZ92 1463 aa27.23■■□□□ 1.95
TSPAN4-206ENST00000397408 NPHP1O15259 732 aa27.23■■□□□ 1.95
TSPAN4-206ENST00000397408 NBPF5PQ86XG9 351 aaPredicted RBP27.23■■□□□ 1.95
TSPAN4-206ENST00000397408 CNBD1Q8NA66 436 aa27.23■■□□□ 1.95
TSPAN4-206ENST00000397408 PLBD2Q8NHP8 589 aa27.23■■□□□ 1.95
TSPAN4-206ENST00000397408 KIAA1551Q9HCM1 1747 aa27.22■■□□□ 1.95
TSPAN4-206ENST00000397408 PRR5LQ6MZQ0 368 aa27.22■■□□□ 1.95
TSPAN4-206ENST00000397408 ANKRD13DQ6ZTN6 518 aa27.22■■□□□ 1.95
TSPAN4-206ENST00000397408 FAM177BA6PVY3 158 aa27.21■■□□□ 1.95
TSPAN4-206ENST00000397408 UBN2Q6ZU65 1347 aa27.21■■□□□ 1.95
TSPAN4-206ENST00000397408 ANKRD36CQ5JPF3 1778 aa27.21■■□□□ 1.95
TSPAN4-206ENST00000397408 SLC4A2P04920 1241 aa27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 HSP90AB3PQ58FF7 597 aa27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 ZNF34Q8IZ26 560 aa27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 TRMT2AQ8IZ69 625 aaKnown RBP27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 CCDC24Q8N4L8 307 aa27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 ARFGEF2Q9Y6D5 1785 aa27.2■■□□□ 1.94
TSPAN4-206ENST00000397408 N4BP2Q86UW6 1770 aaPredicted RBP27.19■■□□□ 1.94
TSPAN4-206ENST00000397408 TGFB2P61812 414 aa27.19■■□□□ 1.94
TSPAN4-206ENST00000397408 ST5P78524 1137 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 TCIRG1Q13488 830 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 G2E3Q7L622 706 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 RIC3Q7Z5B4 369 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 ANKRD31Q8N7Z5 1873 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 CACNA1FO60840 1977 aa27.17■■□□□ 1.94
TSPAN4-206ENST00000397408 A0A0G2JLW4 131 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 DDX58O95786 925 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 DPEP1P16444 411 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 TPTE2Q6XPS3 522 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 WWC3Q9ULE0 1092 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 PARP10Q53GL7 1025 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 PELP1Q8IZL8 1130 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
TSPAN4-206ENST00000397408 IBTKQ9P2D0 1353 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-206ENST00000397408 FLIIQ13045 1269 aa27.15■■□□□ 1.94
TSPAN4-206ENST00000397408 SUSD4Q5VX71 490 aa27.15■■□□□ 1.94
TSPAN4-206ENST00000397408 NYXQ9GZU5 481 aa27.15■■□□□ 1.94
TSPAN4-206ENST00000397408 DCAF8L1A6NGE4 600 aa27.14■■□□□ 1.93
TSPAN4-206ENST00000397408 GTF2E1P29083 439 aaPredicted RBP27.14■■□□□ 1.93
TSPAN4-206ENST00000397408 CHRNA5P30532 468 aa27.14■■□□□ 1.93
TSPAN4-206ENST00000397408 BRIP1Q9BX63 1249 aa27.14■■□□□ 1.93
TSPAN4-206ENST00000397408 GOLGB1Q14789 3259 aaKnown RBP27.13■■□□□ 1.93
TSPAN4-206ENST00000397408 NUTM1Q86Y26 1132 aa27.13■■□□□ 1.93
TSPAN4-206ENST00000397408 ADCY9O60503 1353 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 ABCC12Q96J65 1359 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 NTSR2O95665 410 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 GPR162Q16538 588 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 PPP1R42Q7Z4L9 355 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 NLRP10Q86W26 655 aa27.12■■□□□ 1.93
TSPAN4-206ENST00000397408 PI4KAP2A4QPH2 592 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 ATP5J2-PTCD1G3V325 749 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 PDE6BP35913 854 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 KSR2Q6VAB6 950 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 C2CD5Q86YS7 1000 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 PI4KAP1Q8N8J0 262 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 ISCA1Q9BUE6 129 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 MAP3K2Q9Y2U5 619 aa27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 BRCA1P38398 1863 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-206ENST00000397408 KCNA3P22001 575 aa27.1■■□□□ 1.93
TSPAN4-206ENST00000397408 FKBP5Q13451 457 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-206ENST00000397408 ERFEQ4G0M1 354 aa27.1■■□□□ 1.93
TSPAN4-206ENST00000397408 MYD88Q99836 296 aa27.1■■□□□ 1.93
TSPAN4-206ENST00000397408 UTP14AQ9BVJ6 771 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms