RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 UTP14AQ9BVJ6 771 aaKnown RBP20.21■□□□□ 0.83
MCF2L-208ENST00000397030 MSH6P52701 1360 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 SMTNL1A8MU46 457 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 HOOK3Q86VS8 718 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 BEGAINQ9BUH8 593 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-208ENST00000397030 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 GOLGA6L7A0A1B0GV03 622 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 TSPY3P0CV98 308 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 TSPY8P0CW00 308 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 IDEP14735 1019 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 EMILIN1Q9Y6C2 1016 aa20.2■□□□□ 0.82
MCF2L-208ENST00000397030 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-208ENST00000397030 WDR63Q8IWG1 891 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC152Q4G0S7 254 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 VPS36Q86VN1 386 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 GOLGA6L10A0A0M3HER8 536 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 MX1P20591 662 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CPLX3Q8WVH0 158 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
MCF2L-208ENST00000397030 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
MCF2L-208ENST00000397030 GSTO1P78417 241 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 TMEM67Q5HYA8 995 aa20.19■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC40Q4G0X9 1142 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 OTUD6BQ8N6M0 293 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 STX8Q9UNK0 236 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 STAMBPO95630 424 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 MRE11P49959 708 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 SP4Q02446 784 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 DNAAF4Q8WXU2 420 aa20.18■□□□□ 0.82
MCF2L-208ENST00000397030 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-208ENST00000397030 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
MCF2L-208ENST00000397030 ZBTB21Q9ULJ3 1066 aa20.17■□□□□ 0.82
MCF2L-208ENST00000397030 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
MCF2L-208ENST00000397030 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
MCF2L-208ENST00000397030 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-208ENST00000397030 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
MCF2L-208ENST00000397030 JAG2Q9Y219 1238 aa20.17■□□□□ 0.82
MCF2L-208ENST00000397030 PHACTR2O75167 634 aa20.16■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC174Q6PII3 467 aa20.16■□□□□ 0.82
MCF2L-208ENST00000397030 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
MCF2L-208ENST00000397030 EP400NLQ6ZTU2 488 aa20.16■□□□□ 0.82
MCF2L-208ENST00000397030 ERLIN1O75477 346 aa20.15■□□□□ 0.82
MCF2L-208ENST00000397030 CETN1Q12798 172 aa20.15■□□□□ 0.82
MCF2L-208ENST00000397030 MTIF2P46199 727 aaKnown RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 RBM10P98175 930 aaKnown RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 KIF5BP33176 963 aa20.15■□□□□ 0.82
MCF2L-208ENST00000397030 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
MCF2L-208ENST00000397030 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
MCF2L-208ENST00000397030 FGFR1OPO95684 399 aaKnown RBP20.14■□□□□ 0.81
MCF2L-208ENST00000397030 DDB1Q16531 1140 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 TMCO5BA8MYB1 307 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 CALM1P0DP23 149 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 CALM2P0DP24 149 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 CALM3P0DP25 149 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 LUZP1Q86V48 1076 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 TBCAO75347 108 aaKnown RBP20.14■□□□□ 0.81
MCF2L-208ENST00000397030 TERF1P54274 439 aa20.14■□□□□ 0.81
MCF2L-208ENST00000397030 TTF1Q15361 905 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-208ENST00000397030 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 MICU3Q86XE3 530 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 IFFO1Q0D2I5 559 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 SLC26A6Q9BXS9 759 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 TCP11L1Q9NUJ3 509 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
MCF2L-208ENST00000397030 PRKG1Q13976 671 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 ANXA1P04083 346 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 SERPINA10Q9UK55 444 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 CYP7A1P22680 504 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 STXBP4Q6ZWJ1 553 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 CNNM3Q8NE01 707 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 ZCRB1Q8TBF4 217 aaKnown RBP20.12■□□□□ 0.81
MCF2L-208ENST00000397030 ISM2Q6H9L7 571 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 INCENPQ9NQS7 918 aa20.12■□□□□ 0.81
MCF2L-208ENST00000397030 ZNF804AQ7Z570 1209 aa20.11■□□□□ 0.81
MCF2L-208ENST00000397030 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
MCF2L-208ENST00000397030 TSNARE1Q96NA8 513 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms