RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 RGL2O15211 777 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 CT47B1P0C2W7 299 aaPredicted RBP17.53■□□□□ 0.4
GAPDH-204ENST00000396859 FKBP8Q14318 412 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 TTLL7Q6ZT98 887 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
GAPDH-204ENST00000396859 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
GAPDH-204ENST00000396859 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
GAPDH-204ENST00000396859 MMP10P09238 476 aa17.52■□□□□ 0.4
GAPDH-204ENST00000396859 PTGER2P43116 358 aa17.52■□□□□ 0.4
GAPDH-204ENST00000396859 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.4
GAPDH-204ENST00000396859 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
GAPDH-204ENST00000396859 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
GAPDH-204ENST00000396859 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
GAPDH-204ENST00000396859 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
GAPDH-204ENST00000396859 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
GAPDH-204ENST00000396859 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
GAPDH-204ENST00000396859 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
GAPDH-204ENST00000396859 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
GAPDH-204ENST00000396859 NPHP1O15259 732 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 NFIXQ14938 502 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
GAPDH-204ENST00000396859 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 PLBD2Q8NHP8 589 aa17.49■□□□□ 0.39
GAPDH-204ENST00000396859 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
GAPDH-204ENST00000396859 CACNA1FO60840 1977 aa17.48■□□□□ 0.39
GAPDH-204ENST00000396859 TM4SF1P30408 202 aa17.48■□□□□ 0.39
GAPDH-204ENST00000396859 HLFQ16534 295 aa17.48■□□□□ 0.39
GAPDH-204ENST00000396859 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
GAPDH-204ENST00000396859 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.391e-25■□□□□ 8.2
GAPDH-204ENST00000396859 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
GAPDH-204ENST00000396859 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
GAPDH-204ENST00000396859 FLIIQ13045 1269 aa17.46■□□□□ 0.39
GAPDH-204ENST00000396859 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
GAPDH-204ENST00000396859 NUP98P52948 1817 aa17.46■□□□□ 0.39
GAPDH-204ENST00000396859 SERPINB2P05120 415 aa17.45■□□□□ 0.38
GAPDH-204ENST00000396859 DDR1Q08345 913 aa17.45■□□□□ 0.38
GAPDH-204ENST00000396859 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
GAPDH-204ENST00000396859 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
GAPDH-204ENST00000396859 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
GAPDH-204ENST00000396859 GPTP24298 496 aa17.44■□□□□ 0.38
GAPDH-204ENST00000396859 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
GAPDH-204ENST00000396859 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
GAPDH-204ENST00000396859 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
GAPDH-204ENST00000396859 NEXNQ0ZGT2 675 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 TCIRG1Q13488 830 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 G2E3Q7L622 706 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 PPP1R42Q7Z4L9 355 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 ARFGEF2Q9Y6D5 1785 aa17.43■□□□□ 0.38
GAPDH-204ENST00000396859 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 FAM177BA6PVY3 158 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 ST5P78524 1137 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 ZNF34Q8IZ26 560 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
GAPDH-204ENST00000396859 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 FHDC1Q9C0D6 1143 aaPredicted RBP17.42■□□□□ 0.38
GAPDH-204ENST00000396859 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
GAPDH-204ENST00000396859 MYD88Q99836 296 aa17.41■□□□□ 0.38
GAPDH-204ENST00000396859 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
GAPDH-204ENST00000396859 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
GAPDH-204ENST00000396859 METTL22Q9BUU2 404 aaPredicted RBP17.4■□□□□ 0.38
GAPDH-204ENST00000396859 PTPRCP08575 1304 aa17.4■□□□□ 0.38
GAPDH-204ENST00000396859 C10orf71Q711Q0 1435 aa17.39■□□□□ 0.38
GAPDH-204ENST00000396859 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
GAPDH-204ENST00000396859 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
GAPDH-204ENST00000396859 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
GAPDH-204ENST00000396859 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.37
GAPDH-204ENST00000396859 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
GAPDH-204ENST00000396859 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
GAPDH-204ENST00000396859 IBTKQ9P2D0 1353 aaPredicted RBP17.39■□□□□ 0.37
GAPDH-204ENST00000396859 SUSD4Q5VX71 490 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 ADCY9O60503 1353 aa17.38■□□□□ 0.37
GAPDH-204ENST00000396859 PDE6BP35913 854 aa17.37■□□□□ 0.37
GAPDH-204ENST00000396859 TGFB2P61812 414 aa17.37■□□□□ 0.37
GAPDH-204ENST00000396859 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
GAPDH-204ENST00000396859 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
GAPDH-204ENST00000396859 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
GAPDH-204ENST00000396859 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
GAPDH-204ENST00000396859 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
GAPDH-204ENST00000396859 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
GAPDH-204ENST00000396859 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
GAPDH-204ENST00000396859 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms