RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
MYD88-201ENST00000396334 KCNF1Q9H3M0 494 aa17.01■□□□□ 0.31
MYD88-201ENST00000396334 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
MYD88-201ENST00000396334 MTMR6Q9Y217 621 aa17.01■□□□□ 0.31
MYD88-201ENST00000396334 LARGE1O95461 756 aa17■□□□□ 0.31
MYD88-201ENST00000396334 TPM3P06753 285 aa17■□□□□ 0.31
MYD88-201ENST00000396334 CNTROBQ8N137 903 aa17■□□□□ 0.31
MYD88-201ENST00000396334 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
MYD88-201ENST00000396334 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
MYD88-201ENST00000396334 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 FIBPO43427 364 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 GIMAP6Q6P9H5 292 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
MYD88-201ENST00000396334 HDGFP51858 240 aaKnown RBP16.99■□□□□ 0.31
MYD88-201ENST00000396334 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 VPS53Q5VIR6 699 aa16.99■□□□□ 0.31
MYD88-201ENST00000396334 DIP2BQ9P265 1576 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 TM6SF1Q9BZW5 370 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
MYD88-201ENST00000396334 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 GJB2P29033 226 aa16.97■□□□□ 0.31
MYD88-201ENST00000396334 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
MYD88-201ENST00000396334 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 ZSWIM6Q9HCJ5 1215 aa16.97■□□□□ 0.31
MYD88-201ENST00000396334 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
MYD88-201ENST00000396334 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
MYD88-201ENST00000396334 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
MYD88-201ENST00000396334 CPA1P15085 419 aa16.96■□□□□ 0.31
MYD88-201ENST00000396334 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
MYD88-201ENST00000396334 SOX12O15370 315 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
MYD88-201ENST00000396334 CCDC83Q8IWF9 413 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
MYD88-201ENST00000396334 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 NCBP1Q09161 790 aaKnown RBP16.95■□□□□ 0.3
MYD88-201ENST00000396334 NAA30Q147X3 362 aaPredicted RBP16.95■□□□□ 0.3
MYD88-201ENST00000396334 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 RGPD8O14715 1765 aaPredicted RBP16.95■□□□□ 0.3
MYD88-201ENST00000396334 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 OGFRQ9NZT2 677 aa16.95■□□□□ 0.3
MYD88-201ENST00000396334 PTH1RQ03431 593 aa16.94■□□□□ 0.3
MYD88-201ENST00000396334 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
MYD88-201ENST00000396334 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
MYD88-201ENST00000396334 CCDC192P0DO97 292 aa16.94■□□□□ 0.3
MYD88-201ENST00000396334 FEZ1Q99689 392 aa16.94■□□□□ 0.3
MYD88-201ENST00000396334 ELP1O95163 1332 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 CHAF1AQ13111 956 aaPredicted RBP16.93■□□□□ 0.3
MYD88-201ENST00000396334 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 TAF3Q5VWG9 929 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
MYD88-201ENST00000396334 SLFN14P0C7P3 912 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 AMPHP49418 695 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
MYD88-201ENST00000396334 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 CTNNA3Q9UI47 895 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
MYD88-201ENST00000396334 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 NECTIN1Q15223 517 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 RUFY2Q8WXA3 655 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 JAKMIP1Q96N16 626 aaKnown RBP16.92■□□□□ 0.3
MYD88-201ENST00000396334 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 GOLGA6L6A8MZA4 724 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 PDIA4P13667 645 aaKnown RBP16.92■□□□□ 0.3
MYD88-201ENST00000396334 MTX1Q13505 466 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 ME3Q16798 604 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 MRVI1Q9Y6F6 885 aa16.92■□□□□ 0.3
MYD88-201ENST00000396334 TTC6Q86TZ1 520 aa16.91■□□□□ 0.3
MYD88-201ENST00000396334 TNRQ92752 1358 aa16.91■□□□□ 0.3
MYD88-201ENST00000396334 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
MYD88-201ENST00000396334 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
MYD88-201ENST00000396334 PRPF40BQ6NWY9 871 aaKnown RBP16.91■□□□□ 0.3
MYD88-201ENST00000396334 KCNJ4P48050 445 aa16.9■□□□□ 0.3
MYD88-201ENST00000396334 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
MYD88-201ENST00000396334 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
MYD88-201ENST00000396334 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
MYD88-201ENST00000396334 HOXC9P31274 260 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 MAP3K11Q16584 847 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 HOXB7P09629 217 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 TYRO3Q06418 890 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 MLECQ14165 292 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 TPCN1Q9ULQ1 816 aa16.89■□□□□ 0.29
MYD88-201ENST00000396334 KRT85P78386 507 aa16.88■□□□□ 0.29
MYD88-201ENST00000396334 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms