RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 SGSM2O43147 1006 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 LARP6Q9BRS8 491 aaKnown RBP19.26■□□□□ 0.67
PDE1C-202ENST00000396182 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 UBE2HP62256 183 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 RASEFQ8IZ41 740 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 BCL2L12Q9HB09 334 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 SNX14Q9Y5W7 946 aa19.26■□□□□ 0.67
PDE1C-202ENST00000396182 ZSCAN22P10073 491 aaPredicted RBP19.25■□□□□ 0.67
PDE1C-202ENST00000396182 LGR6Q9HBX8 967 aa19.25■□□□□ 0.67
PDE1C-202ENST00000396182 EPB41L2O43491 1005 aaKnown RBP19.25■□□□□ 0.67
PDE1C-202ENST00000396182 ATP2B3Q16720 1220 aa19.25■□□□□ 0.67
PDE1C-202ENST00000396182 PPP4R3BQ5MIZ7 849 aa19.25■□□□□ 0.67
PDE1C-202ENST00000396182 FUCA2Q9BTY2 467 aa19.25■□□□□ 0.67
PDE1C-202ENST00000396182 LSG1Q9H089 658 aaKnown RBP19.25■□□□□ 0.67
PDE1C-202ENST00000396182 RAD50Q92878 1312 aa19.25■□□□□ 0.67
PDE1C-202ENST00000396182 CBX1P83916 185 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 KIF1BPQ96EK5 621 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 CHMP4AQ9BY43 222 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 PI4KAP2A4QPH2 592 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 KCNQ3O43525 872 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 EIF4A1P60842 406 aaKnown RBP19.24■□□□□ 0.67
PDE1C-202ENST00000396182 BEND3Q5T5X7 828 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 PI4KAP1Q8N8J0 262 aa19.24■□□□□ 0.67
PDE1C-202ENST00000396182 ANXA1P04083 346 aa19.23■□□□□ 0.67
PDE1C-202ENST00000396182 KIAA1524Q8TCG1 905 aa19.23■□□□□ 0.67
PDE1C-202ENST00000396182 TTC14Q96N46 770 aa19.23■□□□□ 0.67
PDE1C-202ENST00000396182 KCNF1Q9H3M0 494 aa19.23■□□□□ 0.67
PDE1C-202ENST00000396182 AP5Z1O43299 807 aa19.23■□□□□ 0.67
PDE1C-202ENST00000396182 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
PDE1C-202ENST00000396182 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
PDE1C-202ENST00000396182 AK2P54819 239 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 PYCARDQ9ULZ3 195 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 STX6O43752 255 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 DNAAF4Q8WXU2 420 aa19.22■□□□□ 0.67
PDE1C-202ENST00000396182 CEMIPQ8WUJ3 1361 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 FIBPO43427 364 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 F13A1P00488 732 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 CPA1P15085 419 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 SYT1P21579 422 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 GIMAP6Q6P9H5 292 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 RUFY3Q7L099 469 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 MARF1Q9Y4F3 1742 aaKnown RBP19.21■□□□□ 0.67
PDE1C-202ENST00000396182 KCNA6P17658 529 aa19.21■□□□□ 0.67
PDE1C-202ENST00000396182 NBPF6Q5VWK0 638 aa19.2■□□□□ 0.66
PDE1C-202ENST00000396182 NBPF4Q96M43 638 aa19.2■□□□□ 0.66
PDE1C-202ENST00000396182 GTPBP4Q9BZE4 634 aaKnown RBP19.2■□□□□ 0.66
PDE1C-202ENST00000396182 DTNBO60941 627 aa19.2■□□□□ 0.66
PDE1C-202ENST00000396182 RIOK3O14730 519 aaKnown RBP19.19■□□□□ 0.66
PDE1C-202ENST00000396182 PDCL2Q8N4E4 241 aa19.19■□□□□ 0.66
PDE1C-202ENST00000396182 DIAPH3Q9NSV4 1193 aa19.19■□□□□ 0.66
PDE1C-202ENST00000396182 ARHGAP23Q9P227 1491 aa19.19■□□□□ 0.66
PDE1C-202ENST00000396182 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
PDE1C-202ENST00000396182 SLIT1O75093 1534 aa19.18■□□□□ 0.66
PDE1C-202ENST00000396182 ANKRD7Q92527 254 aa19.18■□□□□ 0.66
PDE1C-202ENST00000396182 LARGE1O95461 756 aa19.17■□□□□ 0.66
PDE1C-202ENST00000396182 TPM3P06753 285 aa19.17■□□□□ 0.66
PDE1C-202ENST00000396182 CHAF1AQ13111 956 aaPredicted RBP19.17■□□□□ 0.66
PDE1C-202ENST00000396182 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
PDE1C-202ENST00000396182 ATP6V1DQ9Y5K8 247 aa19.17■□□□□ 0.66
PDE1C-202ENST00000396182 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
PDE1C-202ENST00000396182 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
PDE1C-202ENST00000396182 ADCY9O60503 1353 aa19.17■□□□□ 0.66
PDE1C-202ENST00000396182 CASTP20810 708 aaKnown RBP19.16■□□□□ 0.66
PDE1C-202ENST00000396182 PTH1RQ03431 593 aa19.16■□□□□ 0.66
PDE1C-202ENST00000396182 IP6K1Q92551 441 aa19.16■□□□□ 0.66
PDE1C-202ENST00000396182 SMC3Q9UQE7 1217 aa19.16■□□□□ 0.66
PDE1C-202ENST00000396182 CTIFO43310 598 aaKnown RBP19.16■□□□□ 0.66
PDE1C-202ENST00000396182 USP42Q9H9J4 1324 aaKnown RBP19.15■□□□□ 0.66
PDE1C-202ENST00000396182 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
PDE1C-202ENST00000396182 HSP90AB4PQ58FF6 505 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 SPC24Q8NBT2 197 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 HYPKQ9NX55 129 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 BTBD11A6QL63 1104 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 HOXB7P09629 217 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 ADCK5Q3MIX3 580 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 MPRIPQ6WCQ1 1025 aa19.15■□□□□ 0.66
PDE1C-202ENST00000396182 TTC41PQ6P2S7 1318 aa19.14■□□□□ 0.66
PDE1C-202ENST00000396182 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.66
PDE1C-202ENST00000396182 DNM1Q05193 864 aaKnown RBP19.14■□□□□ 0.66
PDE1C-202ENST00000396182 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.66
PDE1C-202ENST00000396182 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.66
PDE1C-202ENST00000396182 SETD1BQ9UPS6 1966 aaKnown RBP19.14■□□□□ 0.65
PDE1C-202ENST00000396182 GOLGA6L6A8MZA4 724 aa19.13■□□□□ 0.65
PDE1C-202ENST00000396182 TEFQ10587 303 aa19.13■□□□□ 0.65
PDE1C-202ENST00000396182 PRPF40BQ6NWY9 871 aaKnown RBP19.13■□□□□ 0.65
PDE1C-202ENST00000396182 CCDC83Q8IWF9 413 aa19.13■□□□□ 0.65
PDE1C-202ENST00000396182 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
PDE1C-202ENST00000396182 LRRC59Q96AG4 307 aaKnown RBP19.13■□□□□ 0.65
PDE1C-202ENST00000396182 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
PDE1C-202ENST00000396182 KIF20AO95235 890 aa19.13■□□□□ 0.65
PDE1C-202ENST00000396182 DDX54Q8TDD1 881 aaKnown RBP19.13■□□□□ 0.65
PDE1C-202ENST00000396182 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
PDE1C-202ENST00000396182 U2AF2P26368 475 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDE1C-202ENST00000396182 MTX1Q13505 466 aa19.12■□□□□ 0.65
PDE1C-202ENST00000396182 PROSER3Q2NL68 480 aa19.12■□□□□ 0.65
PDE1C-202ENST00000396182 JAKMIP1Q96N16 626 aaKnown RBP19.12■□□□□ 0.65
PDE1C-202ENST00000396182 MAP3K2Q9Y2U5 619 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms