RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PDIA6Q15084 440 aa21.35■■□□□ 1.01
CXCL12-206ENST00000395795 TTLL7Q6ZT98 887 aa21.35■■□□□ 1.01
CXCL12-206ENST00000395795 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
CXCL12-206ENST00000395795 TRIM35Q9UPQ4 493 aa21.35■■□□□ 1.01
CXCL12-206ENST00000395795 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
CXCL12-206ENST00000395795 SRGNP10124 158 aa21.34■■□□□ 1.01
CXCL12-206ENST00000395795 RNF181Q9P0P0 153 aa21.34■■□□□ 1.01
CXCL12-206ENST00000395795 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
CXCL12-206ENST00000395795 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
CXCL12-206ENST00000395795 SLX4Q8IY92 1834 aa21.33■■□□□ 1.01
CXCL12-206ENST00000395795 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
CXCL12-206ENST00000395795 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
CXCL12-206ENST00000395795 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
CXCL12-206ENST00000395795 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
CXCL12-206ENST00000395795 STYK1Q6J9G0 422 aa21.31■■□□□ 1
CXCL12-206ENST00000395795 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
CXCL12-206ENST00000395795 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
CXCL12-206ENST00000395795 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
CXCL12-206ENST00000395795 ZNF652Q9Y2D9 606 aa21.31■■□□□ 1
CXCL12-206ENST00000395795 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
CXCL12-206ENST00000395795 FER1L6Q2WGJ9 1857 aa21.3■■□□□ 1
CXCL12-206ENST00000395795 PROSER3Q2NL68 480 aa21.3■■□□□ 1
CXCL12-206ENST00000395795 NBPF5PQ86XG9 351 aaPredicted RBP21.3■■□□□ 1
CXCL12-206ENST00000395795 RUNDC1Q96C34 613 aa21.3■■□□□ 1
CXCL12-206ENST00000395795 ARFGEF2Q9Y6D5 1785 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 TNRC6CQ9HCJ0 1690 aaKnown RBP21.29■■□□□ 1
CXCL12-206ENST00000395795 CHL1O00533 1208 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 C21orf2O43822 256 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 LMNB1P20700 586 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 ST5P78524 1137 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 KRT24Q2M2I5 525 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 NGEFQ8N5V2 710 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 NUP98P52948 1817 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 ERBB4Q15303 1308 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
CXCL12-206ENST00000395795 ABCC12Q96J65 1359 aa21.28■■□□□ 1
CXCL12-206ENST00000395795 MYL6BP14649 208 aa21.28■■□□□ 1
CXCL12-206ENST00000395795 MASTLQ96GX5 879 aa21.28■■□□□ 1
CXCL12-206ENST00000395795 HSPA6P17066 643 aa21.27■■□□□ 1
CXCL12-206ENST00000395795 PRPF40BQ6NWY9 871 aaKnown RBP21.27■■□□□ 1
CXCL12-206ENST00000395795 ZC3H4Q9UPT8 1303 aaKnown RBP21.27■□□□□ 0.99
CXCL12-206ENST00000395795 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 TPTE2Q6XPS3 522 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 ZNF34Q8IZ26 560 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 ZNF219Q9P2Y4 722 aaPredicted RBP21.26■□□□□ 0.99
CXCL12-206ENST00000395795 CCDC88AQ3V6T2 1871 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 LTBP3Q9NS15 1303 aa21.26■□□□□ 0.99
CXCL12-206ENST00000395795 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
CXCL12-206ENST00000395795 TOMM70O94826 608 aa21.25■□□□□ 0.99
CXCL12-206ENST00000395795 ANXA1P04083 346 aa21.25■□□□□ 0.99
CXCL12-206ENST00000395795 SNED1Q8TER0 1413 aa21.25■□□□□ 0.99
CXCL12-206ENST00000395795 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
CXCL12-206ENST00000395795 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
CXCL12-206ENST00000395795 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
CXCL12-206ENST00000395795 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
CXCL12-206ENST00000395795 CCDC184Q52MB2 194 aa21.24■□□□□ 0.99
CXCL12-206ENST00000395795 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
CXCL12-206ENST00000395795 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
CXCL12-206ENST00000395795 CEP350Q5VT06 3117 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 NPR1P16066 1061 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 EIF2S2P20042 333 aaKnown RBP21.23■□□□□ 0.99
CXCL12-206ENST00000395795 SUSD4Q5VX71 490 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 GIGYF2Q6Y7W6 1299 aaKnown RBP21.23■□□□□ 0.99
CXCL12-206ENST00000395795 NUTM1Q86Y26 1132 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 RRAGCQ9HB90 399 aa21.23■□□□□ 0.99
CXCL12-206ENST00000395795 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
CXCL12-206ENST00000395795 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
CXCL12-206ENST00000395795 POTECB2RU33 542 aa21.22■□□□□ 0.99
CXCL12-206ENST00000395795 GPTP24298 496 aa21.22■□□□□ 0.99
CXCL12-206ENST00000395795 ERFEQ4G0M1 354 aa21.22■□□□□ 0.99
CXCL12-206ENST00000395795 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
CXCL12-206ENST00000395795 NPHP1O15259 732 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 NTSR2O95665 410 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 KIF6Q6ZMV9 814 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
CXCL12-206ENST00000395795 SLC51AQ86UW1 340 aa21.2■□□□□ 0.98
CXCL12-206ENST00000395795 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
CXCL12-206ENST00000395795 NECTIN2Q92692 538 aa21.19■□□□□ 0.98
CXCL12-206ENST00000395795 TAOK3Q9H2K8 898 aa21.19■□□□□ 0.98
CXCL12-206ENST00000395795 APAF1O14727 1248 aa21.18■□□□□ 0.98
CXCL12-206ENST00000395795 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
CXCL12-206ENST00000395795 NYXQ9GZU5 481 aa21.18■□□□□ 0.98
CXCL12-206ENST00000395795 HOXA10P31260 410 aaPredicted RBP21.17■□□□□ 0.98
CXCL12-206ENST00000395795 COPS6Q7L5N1 327 aa21.17■□□□□ 0.98
CXCL12-206ENST00000395795 XAGE3Q8WTP9 111 aa21.17■□□□□ 0.98
CXCL12-206ENST00000395795 DDX21Q9NR30 783 aaKnown RBP eCLIP21.17■□□□□ 0.98
CXCL12-206ENST00000395795 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
CXCL12-206ENST00000395795 MBIPQ9NS73 344 aa21.16■□□□□ 0.98
CXCL12-206ENST00000395795 CCDC93Q567U6 631 aa21.15■□□□□ 0.98
CXCL12-206ENST00000395795 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
CXCL12-206ENST00000395795 CHPF2Q9P2E5 772 aa21.15■□□□□ 0.98
CXCL12-206ENST00000395795 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
CXCL12-206ENST00000395795 HOXB7P09629 217 aa21.14■□□□□ 0.97
CXCL12-206ENST00000395795 SLC10A5Q5PT55 438 aa21.14■□□□□ 0.97
CXCL12-206ENST00000395795 DNAJC5GQ8N7S2 189 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms