RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CCDC144CPQ8IYA2 1237 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 KAT14Q9H8E8 782 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 PDE4BQ07343 736 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 NBPF6Q5VWK0 638 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-203ENST00000394872 NBPF4Q96M43 638 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 MSH6P52701 1360 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 TRMT1LQ7Z2T5 733 aaKnown RBP12.04□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC12Q8WUD4 166 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-203ENST00000394872 SYCE3A1L190 88 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 VPS36Q86VN1 386 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 ANO10Q9NW15 660 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 ABCC5O15440 1437 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 KIF5BP33176 963 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 ACEP12821 1306 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
COL4A6-203ENST00000394872 MCM4P33991 863 aa12.04□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC152Q4G0S7 254 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 TAF3Q5VWG9 929 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 KIF20AO95235 890 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL4A6-203ENST00000394872 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-203ENST00000394872 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-203ENST00000394872 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 GSTO1P78417 241 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 CNNM3Q8NE01 707 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 FANCAO15360 1455 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 MFSD6Q6ZSS7 791 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
COL4A6-203ENST00000394872 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC102AQ96A19 550 aa12.02□□□□□ -0.48
COL4A6-203ENST00000394872 FERMT2Q96AC1 680 aa12.02□□□□□ -0.48
COL4A6-203ENST00000394872 PLEKHH1Q9ULM0 1364 aa12.02□□□□□ -0.48
COL4A6-203ENST00000394872 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
COL4A6-203ENST00000394872 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
COL4A6-203ENST00000394872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL4A6-203ENST00000394872 UQCRHLA0A096LP55 91 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 UQCRHP07919 91 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 ATP6V1AP38606 617 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 HAND2P61296 217 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
COL4A6-203ENST00000394872 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
COL4A6-203ENST00000394872 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
COL4A6-203ENST00000394872 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 CCDC183Q5T5S1 534 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 SCAF11Q99590 1463 aaKnown RBP12.01□□□□□ -0.49
COL4A6-203ENST00000394872 NSD2O96028 1365 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 TNRQ92752 1358 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 SETDB2Q96T68 719 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 TCP11L1Q9NUJ3 509 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 ZCRB1Q8TBF4 217 aaKnown RBP12.01□□□□□ -0.49
COL4A6-203ENST00000394872 CTNNBL1Q8WYA6 563 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-203ENST00000394872 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
COL4A6-203ENST00000394872 FAM83GA6ND36 823 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
COL4A6-203ENST00000394872 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A6-203ENST00000394872 AMPD3Q01432 767 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
COL4A6-203ENST00000394872 CASQ1P31415 396 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
COL4A6-203ENST00000394872 UQCRFS1P1P0C7P4 283 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 ZSCAN12O43309 604 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 METAP2P50579 478 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A6-203ENST00000394872 TDRD12Q587J7 1177 aaKnown RBP12□□□□□ -0.49
COL4A6-203ENST00000394872 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 TOM1O60784 492 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 CETN1Q12798 172 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 CCDC91Q7Z6B0 441 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 MBIPQ9NS73 344 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 KIF5CO60282 957 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 MICU3Q86XE3 530 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
COL4A6-203ENST00000394872 NCOA7Q8NI08 942 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 C8orf37Q96NL8 207 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
COL4A6-203ENST00000394872 TRIM27P14373 513 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
COL4A6-203ENST00000394872 DNA2P51530 1060 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 STXBP4Q6ZWJ1 553 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-203ENST00000394872 SLC26A6Q9BXS9 759 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 CCDC113Q9H0I3 377 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms