RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TAF7Q15545 349 aaPredicted RBP8.84□□□□□ -0.99
RTN4-205ENST00000394609 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
RTN4-205ENST00000394609 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
RTN4-205ENST00000394609 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -0.99
RTN4-205ENST00000394609 LTBP4Q8N2S1 1624 aa8.84□□□□□ -1
RTN4-205ENST00000394609 PHRF1Q9P1Y6 1649 aaKnown RBP8.84□□□□□ -1
RTN4-205ENST00000394609 IPO8O15397 1037 aaKnown RBP8.83□□□□□ -1
RTN4-205ENST00000394609 AKAP4Q5JQC9 854 aa8.83□□□□□ -1
RTN4-205ENST00000394609 ZNF428Q96B54 188 aa8.83□□□□□ -1
RTN4-205ENST00000394609 STRN4Q9NRL3 753 aa8.83□□□□□ -1
RTN4-205ENST00000394609 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
RTN4-205ENST00000394609 KIF16BQ96L93 1317 aa8.83□□□□□ -1
RTN4-205ENST00000394609 SOWAHBA6NEL2 793 aa8.83□□□□□ -1
RTN4-205ENST00000394609 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
RTN4-205ENST00000394609 TOM1L2Q6ZVM7 507 aa8.83□□□□□ -1
RTN4-205ENST00000394609 SPRYD3Q8NCJ5 442 aa8.83□□□□□ -1
RTN4-205ENST00000394609 IPO9Q96P70 1041 aaKnown RBP8.83□□□□□ -1
RTN4-205ENST00000394609 NCAPD2Q15021 1401 aa8.82□□□□□ -1
RTN4-205ENST00000394609 TATP17735 454 aaPredicted RBP8.82□□□□□ -1
RTN4-205ENST00000394609 EVA1CP58658 441 aa8.82□□□□□ -1
RTN4-205ENST00000394609 MVPQ14764 893 aaKnown RBP8.82□□□□□ -1
RTN4-205ENST00000394609 ITPRIPQ8IWB1 547 aa8.82□□□□□ -1
RTN4-205ENST00000394609 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
RTN4-205ENST00000394609 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
RTN4-205ENST00000394609 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
RTN4-205ENST00000394609 TEFQ10587 303 aa8.81□□□□□ -1
RTN4-205ENST00000394609 TMEM57Q8N5G2 664 aa8.81□□□□□ -1
RTN4-205ENST00000394609 NECTIN2Q92692 538 aa8.81□□□□□ -1
RTN4-205ENST00000394609 CEMIPQ8WUJ3 1361 aa8.81□□□□□ -1
RTN4-205ENST00000394609 WDR17Q8IZU2 1322 aa8.81□□□□□ -1
RTN4-205ENST00000394609 SPDYE16A6NNV3 312 aaPredicted RBP8.81□□□□□ -1
RTN4-205ENST00000394609 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
RTN4-205ENST00000394609 KCNQ3O43525 872 aa8.81□□□□□ -1
RTN4-205ENST00000394609 MS4A1P11836 297 aa8.81□□□□□ -1
RTN4-205ENST00000394609 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
RTN4-205ENST00000394609 RTL5Q5HYW3 569 aaPredicted RBP8.81□□□□□ -1
RTN4-205ENST00000394609 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
RTN4-205ENST00000394609 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
RTN4-205ENST00000394609 SKAP1Q86WV1 359 aa8.81□□□□□ -1
RTN4-205ENST00000394609 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
RTN4-205ENST00000394609 SPG7Q9UQ90 795 aa8.81□□□□□ -1
RTN4-205ENST00000394609 CAMTA1Q9Y6Y1 1673 aa8.8□□□□□ -1
RTN4-205ENST00000394609 BTBD11A6QL63 1104 aa8.8□□□□□ -1
RTN4-205ENST00000394609 TOM1O60784 492 aa8.8□□□□□ -1
RTN4-205ENST00000394609 IGHDP01880 384 aa8.8□□□□□ -1
RTN4-205ENST00000394609 BTG4Q9NY30 223 aa8.8□□□□□ -1
RTN4-205ENST00000394609 RGPD5Q99666 1765 aa8.8□□□□□ -1
RTN4-205ENST00000394609 MEGF6O75095 1541 aa8.8□□□□□ -1
RTN4-205ENST00000394609 UBAP1LF5GYI3 381 aa8.79□□□□□ -1
RTN4-205ENST00000394609 FAM98CQ17RN3 349 aaKnown RBP8.79□□□□□ -1
RTN4-205ENST00000394609 PCDHB15Q9Y5E8 787 aa8.79□□□□□ -1
RTN4-205ENST00000394609 COL18A1P39060 1754 aa8.79□□□□□ -1
RTN4-205ENST00000394609 ROBO1Q9Y6N7 1651 aa8.79□□□□□ -1
RTN4-205ENST00000394609 KDM2BQ8NHM5 1336 aa8.79□□□□□ -1
RTN4-205ENST00000394609 CYP27B1O15528 508 aa8.79□□□□□ -1
RTN4-205ENST00000394609 ADAMTS2O95450 1211 aa8.79□□□□□ -1
RTN4-205ENST00000394609 PHKG2P15735 406 aa8.79□□□□□ -1
RTN4-205ENST00000394609 BCAMP50895 628 aa8.79□□□□□ -1
RTN4-205ENST00000394609 ARHGAP45Q92619 1136 aa8.79□□□□□ -1
RTN4-205ENST00000394609 IRX2Q9BZI1 471 aaPredicted RBP8.79□□□□□ -1
RTN4-205ENST00000394609 BABAM1Q9NWV8 329 aa8.79□□□□□ -1
RTN4-205ENST00000394609 NHSL1Q5SYE7 1610 aa8.78□□□□□ -1
RTN4-205ENST00000394609 COL5A2P05997 1499 aaPredicted RBP8.78□□□□□ -1
RTN4-205ENST00000394609 CRYBG1Q9Y4K1 1723 aa8.78□□□□□ -1
RTN4-205ENST00000394609 EIF4A1P60842 406 aaKnown RBP8.78□□□□□ -1
RTN4-205ENST00000394609 CENPQQ7L2Z9 268 aaPredicted RBP8.78□□□□□ -1
RTN4-205ENST00000394609 G2E3Q7L622 706 aa8.78□□□□□ -1
RTN4-205ENST00000394609 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
RTN4-205ENST00000394609 CARD10Q9BWT7 1032 aa8.78□□□□□ -1
RTN4-205ENST00000394609 DDX19BQ9UMR2 479 aa8.78□□□□□ -1
RTN4-205ENST00000394609 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 PDIA6Q15084 440 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 PACS2Q86VP3 889 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 NFATC2IPQ8NCF5 419 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 API5Q9BZZ5 524 aaKnown RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 EN1Q05925 392 aaPredicted RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 CCDC30Q5VVM6 783 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 ZCRB1Q8TBF4 217 aaKnown RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
RTN4-205ENST00000394609 DDX12PQ92771 950 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 STK31Q9BXU1 1019 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 ZBTB40Q9NUA8 1239 aa8.77□□□□□ -1.01
RTN4-205ENST00000394609 LMO7Q8WWI1 1683 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 ABCC6O95255 1503 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 IL2RBP14784 551 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 AAMPQ13685 434 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 NBR1Q14596 966 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 HDGFL1Q5TGJ6 251 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.76□□□□□ -1.01
RTN4-205ENST00000394609 ABCC4O15439 1325 aa8.76□□□□□ -1.01
RTN4-205ENST00000394609 PRAMEF22A3QJZ6 481 aa8.75□□□□□ -1.01
RTN4-205ENST00000394609 F6X3S4 739 aa8.75□□□□□ -1.01
RTN4-205ENST00000394609 ZBTB7BO15156 539 aaPredicted RBP8.75□□□□□ -1.01
RTN4-205ENST00000394609 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
RTN4-205ENST00000394609 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms