RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 DLG5Q8TDM6 1919 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 SYT1P21579 422 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 HSPA4P34932 840 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 LARP1BQ659C4 914 aaKnown RBP12.63□□□□□ -0.39
ACTN1-203ENST00000394419 FAM173BQ6P4H8 233 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 PTH1RQ03431 593 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 CEBPZQ03701 1054 aaKnown RBP12.63□□□□□ -0.39
ACTN1-203ENST00000394419 CAMK4Q16566 473 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 BEND3Q5T5X7 828 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 MYD88Q99836 296 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
ACTN1-203ENST00000394419 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
ACTN1-203ENST00000394419 GCP02774 474 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
ACTN1-203ENST00000394419 FAM227BQ96M60 508 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 STAP2Q9UGK3 403 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
ACTN1-203ENST00000394419 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
ACTN1-203ENST00000394419 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
ACTN1-203ENST00000394419 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
ACTN1-203ENST00000394419 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 ADCK5Q3MIX3 580 aa12.61□□□□□ -0.39
ACTN1-203ENST00000394419 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
ACTN1-203ENST00000394419 INTS4Q96HW7 963 aaKnown RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
ACTN1-203ENST00000394419 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
ACTN1-203ENST00000394419 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
ACTN1-203ENST00000394419 RAD50Q92878 1312 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 PI4K2BQ8TCG2 481 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 DDX11Q96FC9 970 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
ACTN1-203ENST00000394419 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 H3BQV1 296 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 GRM8O00222 908 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 LARGE1O95461 756 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 CUL4AQ13619 759 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
ACTN1-203ENST00000394419 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-203ENST00000394419 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 SUCLG2Q96I99 432 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 LRRC2Q9BYS8 371 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 XAGE3Q8WTP9 111 aa12.59□□□□□ -0.39
ACTN1-203ENST00000394419 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
ACTN1-203ENST00000394419 TTC12Q9H892 705 aaPredicted RBP12.58□□□□□ -0.39
ACTN1-203ENST00000394419 UQCRHLA0A096LP55 91 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 UQCRHP07919 91 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 CCDC183Q5T5S1 534 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 UBE3BQ7Z3V4 1068 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 CKAP2LQ8IYA6 745 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 FAM184AQ8NB25 1140 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-203ENST00000394419 LSG1Q9H089 658 aaKnown RBP12.58□□□□□ -0.4
ACTN1-203ENST00000394419 KDRP35968 1356 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 F13A1P00488 732 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
ACTN1-203ENST00000394419 TECPR2O15040 1411 aa12.58□□□□□ -0.4
ACTN1-203ENST00000394419 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-203ENST00000394419 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-203ENST00000394419 EAF2Q96CJ1 260 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-203ENST00000394419 HYPKQ9NX55 129 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
ACTN1-203ENST00000394419 ADCY5O95622 1261 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 TPM2P07951 284 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 PSMA5P28066 241 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 KRT28Q7Z3Y7 464 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 AGLP35573 1532 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
ACTN1-203ENST00000394419 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 SALL3Q9BXA9 1300 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms