RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 C8orf76Q96K31 380 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 CAGE1Q8TC20 777 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 GCP02774 474 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 RAB34Q9BZG1 259 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 RFC4P35249 363 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 NUCB1Q02818 461 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 CHPF2Q9P2E5 772 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 GRM8O00222 908 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 TNIP1Q15025 636 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 KCNA6P17658 529 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
PPARGC1B-203ENST00000394320 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 CDCA7Q9BWT1 371 aaPredicted RBP16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 DDB1Q16531 1140 aa16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 GSTO1P78417 241 aa16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 ST5P78524 1137 aa16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
PPARGC1B-203ENST00000394320 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 CTAGE5O15320 804 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 GRPEL1Q9HAV7 217 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 GOLIM4O00461 696 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 KIF5BP33176 963 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 ZFYVE27Q5T4F4 411 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 PDE4BQ07343 736 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 CCDC178Q5BJE1 867 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
PPARGC1B-203ENST00000394320 RANBP6O60518 1105 aaKnown RBP16.83■□□□□ 0.29
PPARGC1B-203ENST00000394320 C6orf229H3BNL8 230 aa16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 NBPF5PQ86XG9 351 aaPredicted RBP16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.28
PPARGC1B-203ENST00000394320 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 WDHD1O75717 1129 aaPredicted RBP16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 HOXB7P09629 217 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 ANAPC15P60006 121 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 MEIS3Q99687 375 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 HOXC9P31274 260 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 ANKRD18AQ8IVF6 992 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 EYA1Q99502 592 aa16.82■□□□□ 0.28
PPARGC1B-203ENST00000394320 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 NYXQ9GZU5 481 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 INSRP06213 1382 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 PYM1Q9BRP8 204 aaKnown RBP16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 DEF6Q9H4E7 631 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 ANO10Q9NW15 660 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 MAP3K19Q56UN5 1328 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 TANGO6Q9C0B7 1094 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 PDCL3Q9H2J4 239 aa16.81■□□□□ 0.28
PPARGC1B-203ENST00000394320 FBLN1P23142 703 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 VAMP4O75379 141 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 KIF20AO95235 890 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 NEK1Q96PY6 1258 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 HLA-DOAP06340 250 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 CUL5Q93034 780 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 TRAF1Q13077 416 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
PPARGC1B-203ENST00000394320 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
PPARGC1B-203ENST00000394320 CCDC194A0A1B0GVG4 234 aa16.79■□□□□ 0.28
PPARGC1B-203ENST00000394320 MFSD6Q6ZSS7 791 aa16.79■□□□□ 0.28
PPARGC1B-203ENST00000394320 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
PPARGC1B-203ENST00000394320 PDE1AP54750 535 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms