RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TOMM70O94826 608 aa24.13■■□□□ 1.45
PDLIM7-205ENST00000393551 HLFQ16534 295 aa24.13■■□□□ 1.45
PDLIM7-205ENST00000393551 PDZRN3Q9UPQ7 1066 aa24.13■■□□□ 1.45
PDLIM7-205ENST00000393551 LMNB1P20700 586 aa24.12■■□□□ 1.45
PDLIM7-205ENST00000393551 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
PDLIM7-205ENST00000393551 ARFGEF2Q9Y6D5 1785 aa24.11■■□□□ 1.45
PDLIM7-205ENST00000393551 RGL2O15211 777 aa24.11■■□□□ 1.45
PDLIM7-205ENST00000393551 SRGNP10124 158 aa24.11■■□□□ 1.45
PDLIM7-205ENST00000393551 ZNF652Q9Y2D9 606 aa24.11■■□□□ 1.45
PDLIM7-205ENST00000393551 NUP98P52948 1817 aa24.11■■□□□ 1.45
PDLIM7-205ENST00000393551 TIAM2Q8IVF5 1701 aa24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 C21orf2O43822 256 aa24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 ST5P78524 1137 aa24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 NBPF5PQ86XG9 351 aaPredicted RBP24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 ZNF219Q9P2Y4 722 aaPredicted RBP24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 NIP7Q9Y221 180 aaKnown RBP eCLIP24.1■■□□□ 1.45
PDLIM7-205ENST00000393551 TNRC6CQ9HCJ0 1690 aaKnown RBP24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 RIPK4P57078 832 aa24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 RRAGCQ9HB90 399 aa24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 DICER1Q9UPY3 1922 aaKnown RBP24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 KDM2BQ8NHM5 1336 aa24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 MYBBP1AQ9BQG0 1328 aaKnown RBP24.09■■□□□ 1.45
PDLIM7-205ENST00000393551 KLRG2A4D1S0 409 aaPredicted RBP24.08■■□□□ 1.45
PDLIM7-205ENST00000393551 NPHP1O15259 732 aa24.08■■□□□ 1.45
PDLIM7-205ENST00000393551 STYK1Q6J9G0 422 aa24.08■■□□□ 1.45
PDLIM7-205ENST00000393551 NGEFQ8N5V2 710 aa24.08■■□□□ 1.45
PDLIM7-205ENST00000393551 ZC3H4Q9UPT8 1303 aaKnown RBP24.08■■□□□ 1.44
PDLIM7-205ENST00000393551 TMPOP42166 694 aaKnown RBP24.07■■□□□ 1.44
PDLIM7-205ENST00000393551 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
PDLIM7-205ENST00000393551 MASTLQ96GX5 879 aa24.07■■□□□ 1.44
PDLIM7-205ENST00000393551 RRP7AQ9Y3A4 280 aaKnown RBP24.07■■□□□ 1.44
PDLIM7-205ENST00000393551 PRPF40BQ6NWY9 871 aaKnown RBP24.06■■□□□ 1.44
PDLIM7-205ENST00000393551 CNKSR1Q969H4 720 aa24.06■■□□□ 1.44
PDLIM7-205ENST00000393551 FAM177BA6PVY3 158 aa24.05■■□□□ 1.44
PDLIM7-205ENST00000393551 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
PDLIM7-205ENST00000393551 RBM46Q8TBY0 533 aaKnown RBP24.05■■□□□ 1.44
PDLIM7-205ENST00000393551 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
PDLIM7-205ENST00000393551 TSPYL4Q9UJ04 414 aa24.05■■□□□ 1.44
PDLIM7-205ENST00000393551 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
PDLIM7-205ENST00000393551 MYL6BP14649 208 aa24.04■■□□□ 1.44
PDLIM7-205ENST00000393551 LRP10Q7Z4F1 713 aa24.04■■□□□ 1.44
PDLIM7-205ENST00000393551 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
PDLIM7-205ENST00000393551 MAP3K15Q6ZN16 1313 aa24.04■■□□□ 1.44
PDLIM7-205ENST00000393551 ERVV-1B6SEH8 477 aa24.03■■□□□ 1.44
PDLIM7-205ENST00000393551 PDIA6Q15084 440 aa24.02■■□□□ 1.44
PDLIM7-205ENST00000393551 LTBP3Q9NS15 1303 aa24.02■■□□□ 1.44
PDLIM7-205ENST00000393551 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
PDLIM7-205ENST00000393551 POTECB2RU33 542 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 NPR1P16066 1061 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 TAOK3Q9H2K8 898 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 ZBTB3Q9H5J0 574 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
PDLIM7-205ENST00000393551 APLP1P51693 650 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 PROSER3Q2NL68 480 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 OLFM4Q6UX06 510 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 NUTM1Q86Y26 1132 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 C16orf71Q8IYS4 520 aaPredicted RBP23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 BABAM1Q9NWV8 329 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 ADAMTS8Q9UP79 889 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 ERBB4Q15303 1308 aa23.99■■□□□ 1.43
PDLIM7-205ENST00000393551 ERFEQ4G0M1 354 aa23.98■■□□□ 1.43
PDLIM7-205ENST00000393551 KIF6Q6ZMV9 814 aa23.98■■□□□ 1.43
PDLIM7-205ENST00000393551 DNAJC5GQ8N7S2 189 aa23.98■■□□□ 1.43
PDLIM7-205ENST00000393551 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
PDLIM7-205ENST00000393551 WDR90Q96KV7 1748 aa23.98■■□□□ 1.43
PDLIM7-205ENST00000393551 ANXA1P04083 346 aa23.97■■□□□ 1.43
PDLIM7-205ENST00000393551 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
PDLIM7-205ENST00000393551 GPTP24298 496 aa23.97■■□□□ 1.43
PDLIM7-205ENST00000393551 FSTL1Q12841 308 aa23.97■■□□□ 1.43
PDLIM7-205ENST00000393551 ZNF34Q8IZ26 560 aa23.97■■□□□ 1.43
PDLIM7-205ENST00000393551 PCNTO95613 3336 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 LMOD3Q0VAK6 560 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 KRT24Q2M2I5 525 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 CRY2Q49AN0 593 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 SUSD4Q5VX71 490 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 RUNDC1Q96C34 613 aa23.96■■□□□ 1.43
PDLIM7-205ENST00000393551 CHL1O00533 1208 aa23.95■■□□□ 1.42
PDLIM7-205ENST00000393551 VEGFAP15692 232 aaPredicted RBP23.95■■□□□ 1.42
PDLIM7-205ENST00000393551 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
PDLIM7-205ENST00000393551 GIGYF2Q6Y7W6 1299 aaKnown RBP23.95■■□□□ 1.42
PDLIM7-205ENST00000393551 GTF2E1P29083 439 aaPredicted RBP23.94■■□□□ 1.42
PDLIM7-205ENST00000393551 HTRA3P83110 453 aa23.94■■□□□ 1.42
PDLIM7-205ENST00000393551 NYXQ9GZU5 481 aa23.94■■□□□ 1.42
PDLIM7-205ENST00000393551 SNED1Q8TER0 1413 aa23.93■■□□□ 1.42
PDLIM7-205ENST00000393551 IBTKQ9P2D0 1353 aaPredicted RBP23.93■■□□□ 1.42
PDLIM7-205ENST00000393551 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDLIM7-205ENST00000393551 CCDC93Q567U6 631 aa23.93■■□□□ 1.42
PDLIM7-205ENST00000393551 NTSR2O95665 410 aa23.92■■□□□ 1.42
PDLIM7-205ENST00000393551 NECTIN2Q92692 538 aa23.92■■□□□ 1.42
PDLIM7-205ENST00000393551 RIC1Q4ADV7 1423 aa23.92■■□□□ 1.42
PDLIM7-205ENST00000393551 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
PDLIM7-205ENST00000393551 C3orf67Q6ZVT6 689 aa23.91■■□□□ 1.42
PDLIM7-205ENST00000393551 SMC1BQ8NDV3 1235 aa23.91■■□□□ 1.42
PDLIM7-205ENST00000393551 DDNO94850 711 aaPredicted RBP23.9■■□□□ 1.42
PDLIM7-205ENST00000393551 ALDH1B1P30837 517 aa23.9■■□□□ 1.42
PDLIM7-205ENST00000393551 FKBP4Q02790 459 aaKnown RBP eCLIP23.9■■□□□ 1.42
PDLIM7-205ENST00000393551 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
PDLIM7-205ENST00000393551 ANKRD36CQ5JPF3 1778 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms