RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 CCDC196A0A1B0GTZ2 297 aa21.31■■□□□ 1
SSC5D-201ENST00000389623 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
SSC5D-201ENST00000389623 CCDC85AQ96PX6 553 aaPredicted RBP21.31■■□□□ 1
SSC5D-201ENST00000389623 BMP2KQ9NSY1 1161 aaPredicted RBP21.31■■□□□ 1
SSC5D-201ENST00000389623 POTEB2H3BUK9 544 aa21.31■■□□□ 1
SSC5D-201ENST00000389623 DNM1Q05193 864 aaKnown RBP21.31■■□□□ 1
SSC5D-201ENST00000389623 PIK3C2GO75747 1445 aa21.3■■□□□ 1
SSC5D-201ENST00000389623 AKAP2Q9Y2D5 859 aa21.3■■□□□ 1
SSC5D-201ENST00000389623 TAX1BP1Q86VP1 789 aa21.3■■□□□ 1
SSC5D-201ENST00000389623 KIF14Q15058 1648 aa21.3■■□□□ 1
SSC5D-201ENST00000389623 INTS4Q96HW7 963 aaKnown RBP21.29■■□□□ 1
SSC5D-201ENST00000389623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.29■■□□□ 1
SSC5D-201ENST00000389623 THEMISQ8N1K5 641 aaPredicted RBP21.29■■□□□ 1
SSC5D-201ENST00000389623 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
SSC5D-201ENST00000389623 LMAN1P49257 510 aa21.29■■□□□ 1
SSC5D-201ENST00000389623 MYD88Q99836 296 aa21.29■■□□□ 1
SSC5D-201ENST00000389623 TMX1Q9H3N1 280 aa21.29■■□□□ 1
SSC5D-201ENST00000389623 ORC3Q9UBD5 711 aaPredicted RBP21.29■■□□□ 1
SSC5D-201ENST00000389623 WASLO00401 505 aaPredicted RBP21.29■■□□□ 1
SSC5D-201ENST00000389623 SSBP05455 408 aaKnown RBP eCLIP21.29■■□□□ 1
SSC5D-201ENST00000389623 RAI14Q9P0K7 980 aa21.29■■□□□ 1
SSC5D-201ENST00000389623 NUP160Q12769 1436 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 LRP2BPQ9P2M1 347 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 ZNF213O14771 459 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 USP16Q9Y5T5 823 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 PI4KAP2A4QPH2 592 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 IDI1Q13907 227 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 PI4KAP1Q8N8J0 262 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 PLCD4Q9BRC7 762 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 GTPBP4Q9BZE4 634 aaKnown RBP21.28■■□□□ 1
SSC5D-201ENST00000389623 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
SSC5D-201ENST00000389623 GPATCH8Q9UKJ3 1502 aaKnown RBP21.28■■□□□ 1
SSC5D-201ENST00000389623 PLEKHM2Q8IWE5 1019 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 POLR3DP05423 398 aaPredicted RBP21.27■■□□□ 1
SSC5D-201ENST00000389623 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 RBSNQ9H1K0 784 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 DNAJC25Q9H1X3 360 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 NEFHP12036 1026 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 METTL24Q5JXM2 366 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 BRF1Q92994 677 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 FAM107BQ9H098 131 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 TYRO3Q06418 890 aa21.27■■□□□ 1
SSC5D-201ENST00000389623 CCDC82Q8N4S0 544 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
SSC5D-201ENST00000389623 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 USP26Q9BXU7 913 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 NAPBQ9H115 298 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 ZSWIM4Q9H7M6 989 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 PIK3R4Q99570 1358 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 SLU7O95391 586 aaKnown RBP21.26■□□□□ 0.99
SSC5D-201ENST00000389623 CCDC102BQ68D86 513 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 CCDC12Q8WUD4 166 aaPredicted RBP21.26■□□□□ 0.99
SSC5D-201ENST00000389623 HYPKQ9NX55 129 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 DNAI1Q9UI46 699 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
SSC5D-201ENST00000389623 ISM2Q6H9L7 571 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 ARFGAP3Q9NP61 516 aa21.26■□□□□ 0.99
SSC5D-201ENST00000389623 VAMP4O75379 141 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 YEATS4O95619 227 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 PAFAH1B1P43034 410 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 TTC21BQ7Z4L5 1316 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 PPFIA3O75145 1194 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 FBLN1P23142 703 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 RBM8AQ9Y5S9 174 aaKnown RBP21.25■□□□□ 0.99
SSC5D-201ENST00000389623 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
SSC5D-201ENST00000389623 KCNH5Q8NCM2 988 aa21.25■□□□□ 0.99
SSC5D-201ENST00000389623 PHAXQ9H814 394 aaKnown RBP21.25■□□□□ 0.99
SSC5D-201ENST00000389623 USHBP1Q8N6Y0 703 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 AMOTQ4VCS5 1084 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 FKBP15Q5T1M5 1219 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 SLC12A7Q9Y666 1083 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 PTGS1P23219 599 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 UBASH3AP57075 661 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 ATP8B2P98198 1209 aa21.24■□□□□ 0.99
SSC5D-201ENST00000389623 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.24■□□□□ 0.99
SSC5D-201ENST00000389623 V9GYY5 206 aaPredicted RBP21.24■□□□□ 0.99
SSC5D-201ENST00000389623 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
SSC5D-201ENST00000389623 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
SSC5D-201ENST00000389623 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 ABCF2Q9UG63 623 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 GOLIM4O00461 696 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 USO1O60763 962 aaKnown RBP21.22■□□□□ 0.99
SSC5D-201ENST00000389623 CEP85Q6P2H3 762 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 A0A087WZG4 1122 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
SSC5D-201ENST00000389623 ENOX2Q16206 610 aaKnown RBP21.22■□□□□ 0.99
SSC5D-201ENST00000389623 STRN4Q9NRL3 753 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 MAP3K2Q9Y2U5 619 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 GIMAP7Q8NHV1 300 aa21.22■□□□□ 0.99
SSC5D-201ENST00000389623 MRPS27Q92552 414 aaKnown RBP21.22■□□□□ 0.99
SSC5D-201ENST00000389623 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
SSC5D-201ENST00000389623 TUBB4AP04350 444 aa21.21■□□□□ 0.99
SSC5D-201ENST00000389623 ZNF445P59923 1031 aa21.21■□□□□ 0.99
SSC5D-201ENST00000389623 FEZ1Q99689 392 aa21.21■□□□□ 0.99
SSC5D-201ENST00000389623 IFIT3O14879 490 aaKnown RBP21.21■□□□□ 0.99
SSC5D-201ENST00000389623 SYKP43405 635 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms