RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FAM83GA6ND36 823 aa22.33■■□□□ 1.17
SMARCD1-201ENST00000381513 SMC1AQ14683 1233 aaKnown RBP22.33■■□□□ 1.17
SMARCD1-201ENST00000381513 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.17
SMARCD1-201ENST00000381513 SART3Q15020 963 aaKnown RBP22.33■■□□□ 1.16
SMARCD1-201ENST00000381513 TTC31Q49AM3 519 aaPredicted RBP22.33■■□□□ 1.16
SMARCD1-201ENST00000381513 SNX14Q9Y5W7 946 aa22.32■■□□□ 1.16
SMARCD1-201ENST00000381513 A0A1B0GUL7 405 aa22.32■■□□□ 1.16
SMARCD1-201ENST00000381513 CCZ1BP86790 482 aa22.32■■□□□ 1.16
SMARCD1-201ENST00000381513 CCZ1P86791 482 aaPredicted RBP22.32■■□□□ 1.16
SMARCD1-201ENST00000381513 SLC52A1Q9NWF4 448 aa22.32■■□□□ 1.16
SMARCD1-201ENST00000381513 NR1I2O75469 434 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 LEKR1Q6ZMV7 388 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 NCAPGQ9BPX3 1015 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 DNAI1Q9UI46 699 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 PPRC1Q5VV67 1664 aaKnown RBP22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 RASEFQ8IZ41 740 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 EPC1Q9H2F5 836 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 DEF6Q9H4E7 631 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 URI1O94763 535 aaPredicted RBP22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 MYOM2P54296 1465 aa22.31■■□□□ 1.16
SMARCD1-201ENST00000381513 PRR29P0C7W0 189 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 FBXO18Q8NFZ0 1043 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 GOLGA5Q8TBA6 731 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 CLSTN2Q9H4D0 955 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 SPHKAPQ2M3C7 1700 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
SMARCD1-201ENST00000381513 A0A087WWV3 80 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 ZRANB2O95218 330 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 ORC3Q9UBD5 711 aaPredicted RBP22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 CDC25BP30305 580 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 E2F4Q16254 413 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 CDC37L1Q7L3B6 337 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 FYB1O15117 783 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 GUCY2CP25092 1073 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 L2HGDHQ9H9P8 463 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
SMARCD1-201ENST00000381513 MRFAP1L1Q96HT8 127 aa22.28■■□□□ 1.16
SMARCD1-201ENST00000381513 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
SMARCD1-201ENST00000381513 ELP1O95163 1332 aa22.28■■□□□ 1.16
SMARCD1-201ENST00000381513 CLGNO14967 610 aa22.28■■□□□ 1.16
SMARCD1-201ENST00000381513 TTC14Q96N46 770 aa22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 PDRG1Q9NUG6 133 aa22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 NRDCO43847 1150 aa22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 EP400NLQ6ZTU2 488 aa22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 C11orf57Q6ZUT1 292 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-201ENST00000381513 ANKRD65E5RJM6 399 aa22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 F6X3S4 739 aa22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 FAM177A1Q8N128 213 aaPredicted RBP22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 PPP1R13BQ96KQ4 1090 aa22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 JAKMIP1Q96N16 626 aaKnown RBP22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 CARD6Q9BX69 1037 aa22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 SCAND2PQ9GZW5 306 aaPredicted RBP22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 ADAM21Q9UKJ8 722 aa22.27■■□□□ 1.15
SMARCD1-201ENST00000381513 BRD2P25440 801 aaKnown RBP22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 PSEN1P49768 467 aa22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 RNF216Q9NWF9 866 aaPredicted RBP22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 NPHP3Q7Z494 1330 aa22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 DHX37Q8IY37 1157 aaKnown RBP22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
SMARCD1-201ENST00000381513 KIF3BO15066 747 aa22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 SASH3O75995 380 aa22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 CEBPZQ03701 1054 aaKnown RBP22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 BRMS1Q9HCU9 246 aa22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 MMP14P50281 582 aa22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 NUTM1Q86Y26 1132 aa22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 E4F1Q66K89 784 aaPredicted RBP22.25■■□□□ 1.15
SMARCD1-201ENST00000381513 EVCP57679 992 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 PACS2Q86VP3 889 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 SSH2Q76I76 1423 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 TRPM2O94759 1503 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 ARHGEF40Q8TER5 1519 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 ACTN2P35609 894 aa22.24■■□□□ 1.15
SMARCD1-201ENST00000381513 SMC2O95347 1197 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 STK26Q9P289 416 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 SLC4A2P04920 1241 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 BANK1Q8NDB2 785 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 ARFGAP3Q9NP61 516 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 A0A1W2PP64 1363 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 SFPQP23246 707 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 GSDMDP57764 484 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 HYPKQ9NX55 129 aa22.23■■□□□ 1.15
SMARCD1-201ENST00000381513 TBC1D8O95759 1140 aa22.22■■□□□ 1.15
SMARCD1-201ENST00000381513 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
SMARCD1-201ENST00000381513 SKIDA1Q1XH10 827 aa22.22■■□□□ 1.15
SMARCD1-201ENST00000381513 LEO1Q8WVC0 666 aaPredicted RBP22.22■■□□□ 1.15
SMARCD1-201ENST00000381513 IQCB1Q15051 598 aa22.22■■□□□ 1.15
SMARCD1-201ENST00000381513 GNAI2P04899 355 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 TMC6Q7Z403 805 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 REXO1L1PQ8IX06 675 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms