RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
COL4A3BP-203ENST00000380494 SPECC1Q5M775 1068 aa19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 HLTFQ14527 1009 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 RPRD2Q5VT52 1461 aaKnown RBP19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 STAMBPO95630 424 aa19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 NBPF11Q86T75 865 aa19.69■□□□□ 0.74
COL4A3BP-203ENST00000380494 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
COL4A3BP-203ENST00000380494 CCDC102BQ68D86 513 aa19.68■□□□□ 0.74
COL4A3BP-203ENST00000380494 IFI16Q16666 785 aaKnown RBP19.68■□□□□ 0.74
COL4A3BP-203ENST00000380494 UBASH3AP57075 661 aa19.68■□□□□ 0.74
COL4A3BP-203ENST00000380494 DNAI1Q9UI46 699 aa19.68■□□□□ 0.74
COL4A3BP-203ENST00000380494 CABP4P57796 275 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 C6orf163Q5TEZ5 329 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 RASSF4Q9H2L5 321 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 SAMD1Q6SPF0 538 aaPredicted RBP19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 PCF11O94913 1555 aaKnown RBP19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 CAPN2P17655 700 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 DDX12PQ92771 950 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 RAB34Q9BZG1 259 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 TFIP11Q9UBB9 837 aaKnown RBP19.67■□□□□ 0.74
COL4A3BP-203ENST00000380494 JADE2Q9NQC1 790 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 TDRD12Q587J7 1177 aaKnown RBP19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 SPATA24Q86W54 205 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 CNPY2Q9Y2B0 182 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 SLC12A7Q9Y666 1083 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 GOLGA8BA8MQT2 603 aa19.66■□□□□ 0.74
COL4A3BP-203ENST00000380494 MPHOSPH8Q99549 860 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 F13A1P00488 732 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 MYL6BP14649 208 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 GABPB1Q06547 395 aaPredicted RBP19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 RMND1Q9NWS8 449 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 BIN1O00499 593 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 AMPD3Q01432 767 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 ECHDC1Q9NTX5 307 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 MICALL1Q8N3F8 863 aa19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL4A3BP-203ENST00000380494 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.74
COL4A3BP-203ENST00000380494 EBAG9O00559 213 aa19.64■□□□□ 0.73
COL4A3BP-203ENST00000380494 MTIF2P46199 727 aaKnown RBP19.64■□□□□ 0.73
COL4A3BP-203ENST00000380494 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
COL4A3BP-203ENST00000380494 ZNF287Q9HBT7 754 aa19.64■□□□□ 0.73
COL4A3BP-203ENST00000380494 A0A1B0GUL7 405 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 CTAGE9A4FU28 777 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 ZNF213O14771 459 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 CYLC1P35663 651 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 LIG1P18858 919 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 NEK1Q96PY6 1258 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 ATF3P18847 181 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 TMEM266Q2M3C6 531 aa19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 IFIT1P09914 478 aaKnown RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 STMN4Q9H169 189 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 RNF41Q9H4P4 317 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 TTC12Q9H892 705 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-203ENST00000380494 SPAG1Q07617 926 aa19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 CTCFLQ8NI51 663 aaPredicted RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 ERO1AQ96HE7 468 aa19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 SEC63Q9UGP8 760 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 CCDC155Q8N6L0 562 aa19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 IDH1O75874 414 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 ANKS4BQ8N8V4 417 aa19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 CEP63Q96MT8 703 aa19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 SSR1P43307 286 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 MRPS27Q92552 414 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-203ENST00000380494 A0A087WZG4 1122 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 MCM6Q14566 821 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 CCDC121Q6ZUS5 278 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 INTS4Q96HW7 963 aaKnown RBP19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 SYT1P21579 422 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 TYRO3Q06418 890 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 LRP2BPQ9P2M1 347 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 SYKP43405 635 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 ZSWIM4Q9H7M6 989 aa19.61■□□□□ 0.73
COL4A3BP-203ENST00000380494 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 RRAGDQ9NQL2 400 aaPredicted RBP19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 SDSP20132 328 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 PPM1EQ8WY54 764 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 NAPBQ9H115 298 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 HDXQ7Z353 690 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 LRRC27Q9C0I9 530 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 VPS18Q9P253 973 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 FAM135AQ9P2D6 1515 aa19.6■□□□□ 0.73
COL4A3BP-203ENST00000380494 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 HOOK3Q86VS8 718 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms