RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OSBPL3Q9H4L5 887 aa14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 RIMS1Q86UR5 1692 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 CEBPZQ03701 1054 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 AACSQ86V21 672 aa14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 MYL6BP14649 208 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 ADCY5O95622 1261 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 GJB2P29033 226 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 NBPF6Q5VWK0 638 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 ZNF530Q6P9A1 599 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 NBPF4Q96M43 638 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 FLT4P35916 1363 aa14.88□□□□□ -0.03
PRPF40B-202ENST00000380281 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 STX6O43752 255 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 CHGBP05060 677 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 KCNA6P17658 529 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 CKAP2LQ8IYA6 745 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 DNAAF4Q8WXU2 420 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 TNRQ92752 1358 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 USP6P35125 1406 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 MCM2P49736 904 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 MAP3K2Q9Y2U5 619 aa14.87□□□□□ -0.03
PRPF40B-202ENST00000380281 SGSM2O43147 1006 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 KIF1BPQ96EK5 621 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 HSPA4P34932 840 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 CUL4AQ13619 759 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 CERS3Q8IU89 383 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 KIF24Q5T7B8 1368 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 CLTCQ00610 1675 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
PRPF40B-202ENST00000380281 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 LRRC2Q9BYS8 371 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 SALL3Q9BXA9 1300 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 LIMCH1Q9UPQ0 1083 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 TAF6LQ9Y6J9 622 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 TCHHQ07283 1943 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 ZSCAN22P10073 491 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 TRERF1Q96PN7 1200 aa14.85□□□□□ -0.03
PRPF40B-202ENST00000380281 CEP170BQ9Y4F5 1589 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 TMEM2Q9UHN6 1383 aa14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 PSME1Q06323 249 aa14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 SSH3Q8TE77 659 aa14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 IGSF1Q8N6C5 1336 aa14.84□□□□□ -0.03
PRPF40B-202ENST00000380281 ERICH4A6NGS2 130 aa14.83□□□□□ -0.03
PRPF40B-202ENST00000380281 DRC7Q8IY82 874 aa14.83□□□□□ -0.03
PRPF40B-202ENST00000380281 NAA30Q147X3 362 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 GOLGA6L4A6NEF3 574 aa14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
PRPF40B-202ENST00000380281 SBNO1A3KN83 1393 aa14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 A0A087WWV3 80 aa14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 F13A1P00488 732 aa14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 CHAF1AQ13111 956 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 ANKRD7Q92527 254 aa14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 RAD50Q92878 1312 aa14.82□□□□□ -0.04
PRPF40B-202ENST00000380281 ANAPC15P60006 121 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 ME3Q16798 604 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 RICTORQ6R327 1708 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 STAP2Q9UGK3 403 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 PYCARDQ9ULZ3 195 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 MAP3K5Q99683 1374 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 EIF4A1P60842 406 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 SLFNL1Q499Z3 407 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 PHF14O94880 888 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 BEND3Q5T5X7 828 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 OGFRQ9NZT2 677 aa14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-202ENST00000380281 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 NMIQ13287 307 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 CCDC183Q5T5S1 534 aa14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 KDM4AO75164 1064 aa14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 SLFN14P0C7P3 912 aa14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 HSP90B1P14625 803 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-202ENST00000380281 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms