RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 PPFIA2O75334 1257 aa4.21□□□□□ -1.73
PRKD3-202ENST00000379066 U2AF2P26368 475 aaKnown RBP eCLIP4.21□□□□□ -1.734e-8■■□□□ 12.8
PRKD3-202ENST00000379066 SLMAPQ14BN4 828 aa4.21□□□□□ -1.73
PRKD3-202ENST00000379066 ARHGAP27Q6ZUM4 889 aa4.21□□□□□ -1.73
PRKD3-202ENST00000379066 TRMT1Q9NXH9 659 aaKnown RBP4.21□□□□□ -1.73
PRKD3-202ENST00000379066 SWAP70Q9UH65 585 aa4.21□□□□□ -1.73
PRKD3-202ENST00000379066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.21□□□□□ -1.73
PRKD3-202ENST00000379066 RFC4P35249 363 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 NYAP1Q6ZVC0 841 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 UBE2Q1Q7Z7E8 422 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TSC1Q92574 1164 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 MPHOSPH6Q99547 160 aaKnown RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 IQCGQ9H095 443 aaKnown RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TCEAL9Q9UHQ7 104 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 EFCAB5A4FU69 1503 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 C9orf84Q5VXU9 1444 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 hCG_2014768A0A024R1R8 64 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TULP2O00295 520 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 MYCLP1P12525 358 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 IBSPP21815 317 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 IL4RP24394 825 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 ATICP31939 592 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 RDXP35241 583 aaKnown RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TRIM29Q14134 588 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 SMCR8Q8TEV9 937 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 EVC2Q86UK5 1308 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 IRX1P78414 480 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 MAMSTRQ6ZN01 415 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 HOOK3Q86VS8 718 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 TMCO5AQ8N6Q1 288 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 BICD1Q96G01 975 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 NACA2Q9H009 215 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 ATF5Q9Y2D1 282 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-202ENST00000379066 AMOTL2Q9Y2J4 779 aa4.21□□□□□ -1.74
PRKD3-202ENST00000379066 SUPT6HQ7KZ85 1726 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 SESN3P58005 492 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 MYSM1Q5VVJ2 828 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 SYNE3Q6ZMZ3 975 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CCDC65Q8IXS2 484 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ELOA2Q8IYF1 753 aaPredicted RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CHCHD4Q8N4Q1 142 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 RNF214Q8ND24 703 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ANKRD24Q8TF21 1146 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 MTRQ99707 1265 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 MYO1BO43795 1136 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 LONRF1Q17RB8 773 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 HHATQ5VTY9 493 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TDRD7Q8NHU6 1098 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 YIPF2Q9BWQ6 316 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 SEZ6LQ9BYH1 1024 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TRPC5Q9UL62 973 aaPredicted RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TPP2P29144 1249 aaPredicted RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 GTF2F1P35269 517 aaKnown RBP eCLIP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CD151P48509 253 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 MAP3K9P80192 1104 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 RAD51AP2Q09MP3 1159 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TEFQ10587 303 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ZSCAN30Q86W11 494 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 NLRP13Q86W25 1043 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 GBP4Q96PP9 640 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CDC5LQ99459 802 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 UTP6Q9NYH9 597 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 GJA3Q9Y6H8 435 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 PTPRKQ15262 1439 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 KIAA0586Q9BVV6 1533 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ST5P78524 1137 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 DZIP3Q86Y13 1208 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TRIM42Q8IWZ5 723 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ZC3H15Q8WU90 426 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 LZTS2Q9BRK4 669 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CRACR2AQ9BSW2 395 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CWC25Q9NXE8 425 aaPredicted RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 SPG7Q9UQ90 795 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CCDC144AA2RUR9 1427 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 MYBL2P10244 700 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TRDNQ13061 729 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 LARP1BQ659C4 914 aaKnown RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 ATRIPQ8WXE1 791 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 TRIM6Q9C030 488 aaPredicted RBP4.2□□□□□ -1.74
PRKD3-202ENST00000379066 VEZTQ9HBM0 779 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 N6AMT1Q9Y5N5 214 aa4.2□□□□□ -1.74
PRKD3-202ENST00000379066 CCDC196A0A1B0GTZ2 297 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 A0A1B0GUL7 405 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 TRIM64CA6NLI5 447 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 AP1G2O75843 785 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 FXNQ16595 210 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 TMEM132EQ6IEE7 984 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 MYO1HQ8N1T3 1032 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 CRBNQ96SW2 442 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 GRPEL1Q9HAV7 217 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 CDKL5O76039 1030 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 EIF2S2P20042 333 aaKnown RBP4.19□□□□□ -1.74
PRKD3-202ENST00000379066 GABPB1Q06547 395 aaPredicted RBP4.19□□□□□ -1.74
PRKD3-202ENST00000379066 MSL1Q68DK7 614 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 RPGRQ92834 1020 aaKnown RBP4.19□□□□□ -1.74
PRKD3-202ENST00000379066 FEZ1Q99689 392 aa4.19□□□□□ -1.74
PRKD3-202ENST00000379066 TMOD3Q9NYL9 352 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms