RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TTC22Q5TAA0 569 aa23.95■■□□□ 1.42
SSU72-204ENST00000378726 UBR2Q8IWV8 1755 aa23.95■■□□□ 1.42
SSU72-204ENST00000378726 GCKRQ14397 625 aa23.95■■□□□ 1.42
SSU72-204ENST00000378726 SYTL4Q96C24 671 aaPredicted RBP23.95■■□□□ 1.42
SSU72-204ENST00000378726 MTX1Q13505 466 aa23.94■■□□□ 1.42
SSU72-204ENST00000378726 MFAP1P55081 439 aaKnown RBP23.94■■□□□ 1.42
SSU72-204ENST00000378726 VSIG10Q8N0Z9 540 aa23.94■■□□□ 1.42
SSU72-204ENST00000378726 RBM42Q9BTD8 480 aaKnown RBP23.94■■□□□ 1.42
SSU72-204ENST00000378726 TEX13AQ9BXU3 409 aaPredicted RBP23.94■■□□□ 1.42
SSU72-204ENST00000378726 SLKQ9H2G2 1235 aaPredicted RBP23.94■■□□□ 1.42
SSU72-204ENST00000378726 PAPPAQ13219 1627 aa23.93■■□□□ 1.42
SSU72-204ENST00000378726 RAB11FIP3O75154 756 aa23.93■■□□□ 1.42
SSU72-204ENST00000378726 SUCLG2Q96I99 432 aa23.93■■□□□ 1.42
SSU72-204ENST00000378726 SLIT2O94813 1529 aa23.92■■□□□ 1.42
SSU72-204ENST00000378726 PRIM1P49642 420 aaKnown RBP23.92■■□□□ 1.42
SSU72-204ENST00000378726 TTLL7Q6ZT98 887 aa23.92■■□□□ 1.42
SSU72-204ENST00000378726 KAZALD1Q96I82 304 aa23.92■■□□□ 1.42
SSU72-204ENST00000378726 NGLY1Q96IV0 654 aa23.92■■□□□ 1.42
SSU72-204ENST00000378726 TBC1D32Q96NH3 1257 aa23.92■■□□□ 1.42
SSU72-204ENST00000378726 LAMB4A4D0S4 1761 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 BCL9O00512 1426 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 JCADQ9P266 1359 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 NRAPQ86VF7 1730 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 ATP5J2-PTCD1G3V325 749 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 PDE1AP54750 535 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 UNC5CLQ8IV45 518 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 OSBPL3Q9H4L5 887 aa23.91■■□□□ 1.42
SSU72-204ENST00000378726 BARGINQ6ZT62 677 aa23.9■■□□□ 1.42
SSU72-204ENST00000378726 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
SSU72-204ENST00000378726 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SSU72-204ENST00000378726 TBC1D9Q6ZT07 1266 aa23.9■■□□□ 1.42
SSU72-204ENST00000378726 BICC1Q9H694 974 aaKnown RBP23.9■■□□□ 1.42
SSU72-204ENST00000378726 KAT6BQ8WYB5 2073 aa23.89■■□□□ 1.41
SSU72-204ENST00000378726 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.41
SSU72-204ENST00000378726 ANTXR1Q9H6X2 564 aa23.89■■□□□ 1.41
SSU72-204ENST00000378726 IL1RAPL2Q9NP60 686 aa23.89■■□□□ 1.41
SSU72-204ENST00000378726 STARD3NLO95772 234 aa23.88■■□□□ 1.41
SSU72-204ENST00000378726 RHPN1Q8TCX5 695 aa23.88■■□□□ 1.41
SSU72-204ENST00000378726 C22orf23Q9BZE7 217 aa23.88■■□□□ 1.41
SSU72-204ENST00000378726 CDC45O75419 566 aa23.88■■□□□ 1.41
SSU72-204ENST00000378726 MARCH10Q8NA82 808 aaPredicted RBP23.88■■□□□ 1.41
SSU72-204ENST00000378726 KIF1BPQ96EK5 621 aa23.88■■□□□ 1.41
SSU72-204ENST00000378726 CERKQ8TCT0 537 aa23.87■■□□□ 1.41
SSU72-204ENST00000378726 SALL3Q9BXA9 1300 aa23.87■■□□□ 1.41
SSU72-204ENST00000378726 SDSP20132 328 aa23.87■■□□□ 1.41
SSU72-204ENST00000378726 JARID2Q92833 1246 aaPredicted RBP23.87■■□□□ 1.41
SSU72-204ENST00000378726 TBC1D2Q9BYX2 928 aa23.87■■□□□ 1.41
SSU72-204ENST00000378726 ITGB4P16144 1822 aa23.86■■□□□ 1.41
SSU72-204ENST00000378726 A0A087WZG4 1122 aa23.86■■□□□ 1.41
SSU72-204ENST00000378726 MX1P20591 662 aa23.86■■□□□ 1.41
SSU72-204ENST00000378726 SLC4A9Q96Q91 983 aa23.86■■□□□ 1.41
SSU72-204ENST00000378726 ZBTB3Q9H5J0 574 aa23.86■■□□□ 1.41
SSU72-204ENST00000378726 LRP6O75581 1613 aa23.85■■□□□ 1.41
SSU72-204ENST00000378726 NWD2Q9ULI1 1742 aa23.85■■□□□ 1.41
SSU72-204ENST00000378726 OS9Q13438 667 aaPredicted RBP23.85■■□□□ 1.41
SSU72-204ENST00000378726 WNK3Q9BYP7 1800 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 PA2G4Q9UQ80 394 aaKnown RBP23.84■■□□□ 1.41
SSU72-204ENST00000378726 ZNF330Q9Y3S2 320 aaPredicted RBP23.84■■□□□ 1.41
SSU72-204ENST00000378726 A0A0G2JS52 829 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 TSHZ3Q63HK5 1081 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 UBE3BQ7Z3V4 1068 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 ACSBG1Q96GR2 724 aa23.84■■□□□ 1.41
SSU72-204ENST00000378726 STAP2Q9UGK3 403 aa23.83■■□□□ 1.41
SSU72-204ENST00000378726 VPS72Q15906 364 aa23.83■■□□□ 1.4
SSU72-204ENST00000378726 FAM98CQ17RN3 349 aaKnown RBP23.83■■□□□ 1.4
SSU72-204ENST00000378726 NUTM1Q86Y26 1132 aa23.83■■□□□ 1.4
SSU72-204ENST00000378726 FNBP4Q8N3X1 1017 aaPredicted RBP23.82■■□□□ 1.4
SSU72-204ENST00000378726 CYP19A1P11511 503 aaPredicted RBP23.82■■□□□ 1.4
SSU72-204ENST00000378726 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
SSU72-204ENST00000378726 CWC25Q9NXE8 425 aaPredicted RBP23.81■■□□□ 1.4
SSU72-204ENST00000378726 ARFGEF2Q9Y6D5 1785 aa23.8■■□□□ 1.4
SSU72-204ENST00000378726 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
SSU72-204ENST00000378726 H7C1W4 665 aa23.8■■□□□ 1.4
SSU72-204ENST00000378726 CASP7P55210 303 aa23.8■■□□□ 1.4
SSU72-204ENST00000378726 ARXQ96QS3 562 aa23.8■■□□□ 1.4
SSU72-204ENST00000378726 G3BP1Q13283 466 aaKnown RBP eCLIP23.79■■□□□ 1.4
SSU72-204ENST00000378726 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
SSU72-204ENST00000378726 CCDC191Q8NCU4 936 aa23.79■■□□□ 1.4
SSU72-204ENST00000378726 KIF6Q6ZMV9 814 aa23.78■■□□□ 1.4
SSU72-204ENST00000378726 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
SSU72-204ENST00000378726 CASC1Q6TDU7 716 aa23.78■■□□□ 1.4
SSU72-204ENST00000378726 CLASRPQ8N2M8 674 aaKnown RBP23.78■■□□□ 1.4
SSU72-204ENST00000378726 USP21Q9UK80 565 aa23.78■■□□□ 1.4
SSU72-204ENST00000378726 RBM25P49756 843 aaKnown RBP23.77■■□□□ 1.4
SSU72-204ENST00000378726 TCIRG1Q13488 830 aa23.77■■□□□ 1.4
SSU72-204ENST00000378726 SPRYD3Q8NCJ5 442 aa23.77■■□□□ 1.4
SSU72-204ENST00000378726 RABL6Q3YEC7 729 aaPredicted RBP23.76■■□□□ 1.39
SSU72-204ENST00000378726 COL15A1P39059 1388 aa23.76■■□□□ 1.39
SSU72-204ENST00000378726 AOX1Q06278 1338 aa23.76■■□□□ 1.39
SSU72-204ENST00000378726 KLHDC4Q8TBB5 520 aa23.76■■□□□ 1.39
SSU72-204ENST00000378726 TRIM6-TRIM34B2RNG4 842 aa23.75■■□□□ 1.39
SSU72-204ENST00000378726 ISCA1Q9BUE6 129 aa23.75■■□□□ 1.39
SSU72-204ENST00000378726 SIL1Q9H173 461 aa23.75■■□□□ 1.39
SSU72-204ENST00000378726 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.75■■□□□ 1.39
SSU72-204ENST00000378726 ZBTB1Q9Y2K1 713 aa23.75■■□□□ 1.39
SSU72-204ENST00000378726 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
SSU72-204ENST00000378726 AFDNP55196 1824 aaKnown RBP23.75■■□□□ 1.39
SSU72-204ENST00000378726 SASH1O94885 1247 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms