RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 KLHL34Q8N239 644 aa15.07■□□□□ 0
DEPDC4-202ENST00000378244 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
DEPDC4-202ENST00000378244 BCL2L13Q9BXK5 485 aa15.07■□□□□ 0
DEPDC4-202ENST00000378244 PPP1R1BQ9UD71 204 aaPredicted RBP15.07■□□□□ 0
DEPDC4-202ENST00000378244 LAMB4A4D0S4 1761 aa15.07■□□□□ 0
DEPDC4-202ENST00000378244 CAMTA2O94983 1202 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 MMP10P09238 476 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 PTGER2P43116 358 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 KIF6Q6ZMV9 814 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 CASZ1Q86V15 1759 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 POLD1P28340 1107 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 HYPKQ9NX55 129 aa15.06■□□□□ 0
DEPDC4-202ENST00000378244 G2E3Q7L622 706 aa15.05■□□□□ 0
DEPDC4-202ENST00000378244 TBC1D9BQ66K14 1250 aa15.05■□□□□ -0
DEPDC4-202ENST00000378244 FAM177BA6PVY3 158 aa15.04■□□□□ -0
DEPDC4-202ENST00000378244 C4AP0C0L4 1744 aa15.04■□□□□ -0
DEPDC4-202ENST00000378244 NFIXQ14938 502 aa15.04■□□□□ -0
DEPDC4-202ENST00000378244 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
DEPDC4-202ENST00000378244 CHMP4AQ9BY43 222 aa15.04■□□□□ -0
DEPDC4-202ENST00000378244 MAP3K15Q6ZN16 1313 aa15.03■□□□□ -0
DEPDC4-202ENST00000378244 GPTP24298 496 aa15.03■□□□□ -0
DEPDC4-202ENST00000378244 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
DEPDC4-202ENST00000378244 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
DEPDC4-202ENST00000378244 DDR1Q08345 913 aa15.02■□□□□ -0
DEPDC4-202ENST00000378244 CCDC24Q8N4L8 307 aa15.02■□□□□ -0
DEPDC4-202ENST00000378244 SSH1Q8WYL5 1049 aa15.02■□□□□ -0
DEPDC4-202ENST00000378244 NIP7Q9Y221 180 aaKnown RBP eCLIP15.02■□□□□ -0
DEPDC4-202ENST00000378244 ZNF652Q9Y2D9 606 aa15.02■□□□□ -0
DEPDC4-202ENST00000378244 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
DEPDC4-202ENST00000378244 RIC3Q7Z5B4 369 aa15.01□□□□□ -0.01
DEPDC4-202ENST00000378244 SETDB2Q96T68 719 aa15.01□□□□□ -0.01
DEPDC4-202ENST00000378244 NPHP1O15259 732 aa15.01□□□□□ -0.01
DEPDC4-202ENST00000378244 FKBP5Q13451 457 aaPredicted RBP15.01□□□□□ -0.01
DEPDC4-202ENST00000378244 TM4SF1P30408 202 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 FLIIQ13045 1269 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 PI4KAP2A4QPH2 592 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 ERVV-1B6SEH8 477 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
DEPDC4-202ENST00000378244 PI4KAP1Q8N8J0 262 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 PLBD2Q8NHP8 589 aa15□□□□□ -0.01
DEPDC4-202ENST00000378244 POLRMTO00411 1230 aaKnown RBP14.99□□□□□ -0.01
DEPDC4-202ENST00000378244 SERPINB2P05120 415 aa14.99□□□□□ -0.01
DEPDC4-202ENST00000378244 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
DEPDC4-202ENST00000378244 MAP3K2Q9Y2U5 619 aa14.99□□□□□ -0.01
DEPDC4-202ENST00000378244 F6X3S4 739 aa14.98□□□□□ -0.01
DEPDC4-202ENST00000378244 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
DEPDC4-202ENST00000378244 WWC3Q9ULE0 1092 aa14.98□□□□□ -0.01
DEPDC4-202ENST00000378244 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 MYD88Q99836 296 aa14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 BCAR3O75815 825 aa14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 GTF2E1P29083 439 aaPredicted RBP14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 RTL5Q5HYW3 569 aaPredicted RBP14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 KSR2Q6VAB6 950 aa14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 UBN2Q6ZU65 1347 aa14.97□□□□□ -0.01
DEPDC4-202ENST00000378244 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
DEPDC4-202ENST00000378244 TCIRG1Q13488 830 aa14.96□□□□□ -0.01
DEPDC4-202ENST00000378244 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
DEPDC4-202ENST00000378244 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
DEPDC4-202ENST00000378244 SUSD4Q5VX71 490 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 SLC4A10Q6U841 1118 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 ALDH1L2Q3SY69 923 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 CNBD1Q8NA66 436 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 SYT17Q9BSW7 474 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 SCN7AQ01118 1682 aa14.95□□□□□ -0.02
DEPDC4-202ENST00000378244 ADCY9O60503 1353 aa14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 PRR5LQ6MZQ0 368 aa14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 CWF19L2Q2TBE0 894 aaKnown RBP14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 TPTE2Q6XPS3 522 aa14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 JARID2Q92833 1246 aaPredicted RBP14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 NOB1Q9ULX3 412 aaKnown RBP14.94□□□□□ -0.02
DEPDC4-202ENST00000378244 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 DNAAF4Q8WXU2 420 aa14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 METTL22Q9BUU2 404 aaPredicted RBP14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
DEPDC4-202ENST00000378244 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
DEPDC4-202ENST00000378244 NUP98P52948 1817 aa14.92□□□□□ -0.02
DEPDC4-202ENST00000378244 A0A0G2JLW4 131 aa14.92□□□□□ -0.02
DEPDC4-202ENST00000378244 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
DEPDC4-202ENST00000378244 FAM89AQ96GI7 184 aa14.92□□□□□ -0.02
DEPDC4-202ENST00000378244 RGL2O15211 777 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 IGKV5-2P06315 115 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 PARP10Q53GL7 1025 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 ISCA1Q9BUE6 129 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 CHRNA5P30532 468 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 ST5P78524 1137 aa14.91□□□□□ -0.02
DEPDC4-202ENST00000378244 NTSR2O95665 410 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms