RNA–Protein interactions for RNA: ENST00000378202.5

RPP38-203, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-203ENST00000378202 BTBD11A6QL63 1104 aa23.31■■□□□ 1.32
RPP38-203ENST00000378202 CLEC4GQ6UXB4 293 aa23.31■■□□□ 1.32
RPP38-203ENST00000378202 DZIP3Q86Y13 1208 aaKnown RBP23.31■■□□□ 1.32
RPP38-203ENST00000378202 NPC1L1Q9UHC9 1359 aa23.3■■□□□ 1.32
RPP38-203ENST00000378202 POTEIP0CG38 1075 aa23.3■■□□□ 1.32
RPP38-203ENST00000378202 POTEJP0CG39 1038 aa23.3■■□□□ 1.32
RPP38-203ENST00000378202 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
RPP38-203ENST00000378202 C7orf43Q8WVR3 580 aa23.3■■□□□ 1.32
RPP38-203ENST00000378202 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
RPP38-203ENST00000378202 FER1L6Q2WGJ9 1857 aa23.3■■□□□ 1.32
RPP38-203ENST00000378202 SCN7AQ01118 1682 aa23.29■■□□□ 1.32
RPP38-203ENST00000378202 KCNQ3O43525 872 aa23.29■■□□□ 1.32
RPP38-203ENST00000378202 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
RPP38-203ENST00000378202 L3MBTL3Q96JM7 780 aaPredicted RBP23.29■■□□□ 1.32
RPP38-203ENST00000378202 COL3A1P02461 1466 aaPredicted RBP23.29■■□□□ 1.32
RPP38-203ENST00000378202 LDHDQ86WU2 507 aa23.28■■□□□ 1.32
RPP38-203ENST00000378202 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
RPP38-203ENST00000378202 USP16Q9Y5T5 823 aa23.28■■□□□ 1.32
RPP38-203ENST00000378202 NPR1P16066 1061 aa23.27■■□□□ 1.32
RPP38-203ENST00000378202 CCDC93Q567U6 631 aa23.27■■□□□ 1.32
RPP38-203ENST00000378202 ZNF652Q9Y2D9 606 aa23.27■■□□□ 1.32
RPP38-203ENST00000378202 DICER1Q9UPY3 1922 aaKnown RBP23.27■■□□□ 1.32
RPP38-203ENST00000378202 COL11A2P13942 1736 aaPredicted RBP23.26■■□□□ 1.31
RPP38-203ENST00000378202 KLRG2A4D1S0 409 aaPredicted RBP23.26■■□□□ 1.31
RPP38-203ENST00000378202 TAF1DQ9H5J8 278 aaPredicted RBP23.26■■□□□ 1.31
RPP38-203ENST00000378202 PASKQ96RG2 1323 aa23.26■■□□□ 1.31
RPP38-203ENST00000378202 SLX4Q8IY92 1834 aa23.25■■□□□ 1.31
RPP38-203ENST00000378202 RGL2O15211 777 aa23.25■■□□□ 1.31
RPP38-203ENST00000378202 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
RPP38-203ENST00000378202 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
RPP38-203ENST00000378202 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
RPP38-203ENST00000378202 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
RPP38-203ENST00000378202 PIP4K2AP48426 406 aaPredicted RBP23.23■■□□□ 1.31
RPP38-203ENST00000378202 FKBP4Q02790 459 aaKnown RBP eCLIP23.23■■□□□ 1.31
RPP38-203ENST00000378202 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
RPP38-203ENST00000378202 RTKN2Q8IZC4 609 aa23.23■■□□□ 1.31
RPP38-203ENST00000378202 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
RPP38-203ENST00000378202 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
RPP38-203ENST00000378202 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
RPP38-203ENST00000378202 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
RPP38-203ENST00000378202 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
RPP38-203ENST00000378202 ITGBL1O95965 494 aaPredicted RBP23.21■■□□□ 1.31
RPP38-203ENST00000378202 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
RPP38-203ENST00000378202 PRDM10Q9NQV6 1147 aa23.21■■□□□ 1.31
RPP38-203ENST00000378202 NIP7Q9Y221 180 aaKnown RBP eCLIP23.21■■□□□ 1.31
RPP38-203ENST00000378202 FOXN1O15353 648 aa23.2■■□□□ 1.3
RPP38-203ENST00000378202 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
RPP38-203ENST00000378202 HACL1Q9UJ83 578 aa23.2■■□□□ 1.3
RPP38-203ENST00000378202 EAPPQ56P03 285 aaPredicted RBP23.19■■□□□ 1.3
RPP38-203ENST00000378202 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
RPP38-203ENST00000378202 ZNF541Q9H0D2 1346 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 ALDH1B1P30837 517 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 VEGFBP49765 207 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
RPP38-203ENST00000378202 PNMA8AQ86V59 439 aaPredicted RBP23.18■■□□□ 1.3
RPP38-203ENST00000378202 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
RPP38-203ENST00000378202 EPHX2P34913 555 aa23.17■■□□□ 1.3
RPP38-203ENST00000378202 CTCFP49711 727 aaPredicted RBP23.17■■□□□ 1.3
RPP38-203ENST00000378202 OLFM4Q6UX06 510 aa23.17■■□□□ 1.3
RPP38-203ENST00000378202 MCM10Q7L590 875 aa23.17■■□□□ 1.3
RPP38-203ENST00000378202 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
RPP38-203ENST00000378202 FZD9O00144 591 aa23.16■■□□□ 1.3
RPP38-203ENST00000378202 SCN4AP35499 1836 aa23.16■■□□□ 1.3
RPP38-203ENST00000378202 BCORQ6W2J9 1755 aa23.15■■□□□ 1.3
RPP38-203ENST00000378202 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
RPP38-203ENST00000378202 GTF2E1P29083 439 aaPredicted RBP23.15■■□□□ 1.3
RPP38-203ENST00000378202 IARSP41252 1262 aaKnown RBP23.15■■□□□ 1.3
RPP38-203ENST00000378202 SYNE4Q8N205 404 aa23.15■■□□□ 1.3
RPP38-203ENST00000378202 ARFGEF2Q9Y6D5 1785 aa23.14■■□□□ 1.3
RPP38-203ENST00000378202 FAM177BA6PVY3 158 aa23.14■■□□□ 1.29
RPP38-203ENST00000378202 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.29
RPP38-203ENST00000378202 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.29
RPP38-203ENST00000378202 GPC2Q8N158 579 aa23.14■■□□□ 1.29
RPP38-203ENST00000378202 WBP1LQ9NX94 342 aa23.14■■□□□ 1.29
RPP38-203ENST00000378202 CNTROBQ8N137 903 aa23.13■■□□□ 1.29
RPP38-203ENST00000378202 PSMD1Q99460 953 aa23.13■■□□□ 1.29
RPP38-203ENST00000378202 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
RPP38-203ENST00000378202 HLFQ16534 295 aa23.12■■□□□ 1.29
RPP38-203ENST00000378202 CC2D2BQ6DHV5 1058 aa23.12■■□□□ 1.29
RPP38-203ENST00000378202 JDP2Q8WYK2 163 aa23.12■■□□□ 1.29
RPP38-203ENST00000378202 RNF123Q5XPI4 1314 aa23.11■■□□□ 1.29
RPP38-203ENST00000378202 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
RPP38-203ENST00000378202 DCTN1Q14203 1278 aa23.11■■□□□ 1.29
RPP38-203ENST00000378202 CRY2Q49AN0 593 aa23.11■■□□□ 1.29
RPP38-203ENST00000378202 MAP1SQ66K74 1059 aaPredicted RBP23.11■■□□□ 1.29
RPP38-203ENST00000378202 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
RPP38-203ENST00000378202 NYXQ9GZU5 481 aa23.1■■□□□ 1.29
RPP38-203ENST00000378202 ERVV-1B6SEH8 477 aa23.09■■□□□ 1.29
RPP38-203ENST00000378202 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
RPP38-203ENST00000378202 LBX1P52954 281 aa23.08■■□□□ 1.29
RPP38-203ENST00000378202 GRIPAP1Q4V328 841 aa23.08■■□□□ 1.29
RPP38-203ENST00000378202 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
RPP38-203ENST00000378202 EIF6P56537 245 aaKnown RBP23.07■■□□□ 1.28
RPP38-203ENST00000378202 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
RPP38-203ENST00000378202 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
RPP38-203ENST00000378202 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
RPP38-203ENST00000378202 MIS18AQ9NYP9 233 aa23.06■■□□□ 1.28
RPP38-203ENST00000378202 SNED1Q8TER0 1413 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms