RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 USP25Q9UHP3 1055 aa19.95■□□□□ 0.78
PCDHA1-201ENST00000378133 BEND3Q5T5X7 828 aa19.95■□□□□ 0.78
PCDHA1-201ENST00000378133 DNAAF4Q8WXU2 420 aa19.95■□□□□ 0.78
PCDHA1-201ENST00000378133 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 MARF1Q9Y4F3 1742 aaKnown RBP19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 SGSM2O43147 1006 aa19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 TTC12Q9H892 705 aaPredicted RBP19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 ZHX1Q9UKY1 873 aaPredicted RBP19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
PCDHA1-201ENST00000378133 HSPA2P54652 639 aa19.93■□□□□ 0.78
PCDHA1-201ENST00000378133 ZNF710Q8N1W2 664 aa19.93■□□□□ 0.78
PCDHA1-201ENST00000378133 IP6K1Q92551 441 aa19.93■□□□□ 0.78
PCDHA1-201ENST00000378133 LARP6Q9BRS8 491 aaKnown RBP19.93■□□□□ 0.78
PCDHA1-201ENST00000378133 EPB41L2O43491 1005 aaKnown RBP19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 ADCY5O95622 1261 aa19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 DMTNQ08495 405 aa19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 CWC27Q6UX04 472 aaKnown RBP19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 SNX14Q9Y5W7 946 aa19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 GTF2F1P35269 517 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 CNTROBQ8N137 903 aa19.92■□□□□ 0.78
PCDHA1-201ENST00000378133 RAD50Q92878 1312 aa19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 UTP14CQ5TAP6 766 aaKnown RBP19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 RASEFQ8IZ41 740 aa19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 C17orf53Q8N3J3 647 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 N4BP2Q86UW6 1770 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 ZSCAN20P17040 1043 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 LSG1Q9H089 658 aaKnown RBP19.91■□□□□ 0.78
PCDHA1-201ENST00000378133 WDR33Q9C0J8 1336 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 TEFQ10587 303 aa19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 MPRIPQ6WCQ1 1025 aa19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 KIF3AQ9Y496 699 aa19.9■□□□□ 0.78
PCDHA1-201ENST00000378133 TCHHQ07283 1943 aa19.89■□□□□ 0.78
PCDHA1-201ENST00000378133 CBX1P83916 185 aa19.89■□□□□ 0.77
PCDHA1-201ENST00000378133 CCDC183Q5T5S1 534 aa19.89■□□□□ 0.77
PCDHA1-201ENST00000378133 LRRC59Q96AG4 307 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-201ENST00000378133 AK2P54819 239 aa19.89■□□□□ 0.77
PCDHA1-201ENST00000378133 TPRNQ4KMQ1 711 aa19.89■□□□□ 0.77
PCDHA1-201ENST00000378133 LMTK3Q96Q04 1460 aa19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 HOXB7P09629 217 aa19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 HCLS1P14317 486 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 TTC14Q96N46 770 aa19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 FAM177BA6PVY3 158 aa19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 HSP90AB4PQ58FF6 505 aa19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 ZNF530Q6P9A1 599 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-201ENST00000378133 CPA1P15085 419 aa19.87■□□□□ 0.77
PCDHA1-201ENST00000378133 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
PCDHA1-201ENST00000378133 SPTLC3Q9NUV7 552 aa19.87■□□□□ 0.77
PCDHA1-201ENST00000378133 LETM1O95202 739 aaPredicted RBP19.87■□□□□ 0.77
PCDHA1-201ENST00000378133 ADCY9O60503 1353 aa19.87■□□□□ 0.77
PCDHA1-201ENST00000378133 RUFY3Q7L099 469 aa19.86■□□□□ 0.77
PCDHA1-201ENST00000378133 NAP1L2Q9ULW6 460 aaPredicted RBP19.86■□□□□ 0.77
PCDHA1-201ENST00000378133 LTN1O94822 1766 aa19.86■□□□□ 0.77
PCDHA1-201ENST00000378133 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
PCDHA1-201ENST00000378133 GLRX3O76003 335 aaKnown RBP19.86■□□□□ 0.77
PCDHA1-201ENST00000378133 PLCB2Q00722 1185 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 PSME1Q06323 249 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 CLASRPQ8N2M8 674 aaKnown RBP19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 C9orf78Q9NZ63 289 aaPredicted RBP19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 LIMCH1Q9UPQ0 1083 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 KDM4AO75164 1064 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 DIAPH3Q9NSV4 1193 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 PA2G4Q9UQ80 394 aaKnown RBP19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
PCDHA1-201ENST00000378133 DTNBO60941 627 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 CNPY2Q9Y2B0 182 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 STRCP1A6NGW2 1772 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 PROSER3Q2NL68 480 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 TTC41PQ6P2S7 1318 aa19.84■□□□□ 0.77
PCDHA1-201ENST00000378133 SYT1P21579 422 aa19.83■□□□□ 0.77
PCDHA1-201ENST00000378133 PTH1RQ03431 593 aa19.83■□□□□ 0.77
PCDHA1-201ENST00000378133 PLEKHO1Q53GL0 409 aaPredicted RBP19.83■□□□□ 0.77
PCDHA1-201ENST00000378133 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
PCDHA1-201ENST00000378133 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
PCDHA1-201ENST00000378133 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.76
PCDHA1-201ENST00000378133 ATP2B3Q16720 1220 aa19.83■□□□□ 0.76
PCDHA1-201ENST00000378133 USP42Q9H9J4 1324 aaKnown RBP19.83■□□□□ 0.76
PCDHA1-201ENST00000378133 CWF19L2Q2TBE0 894 aaKnown RBP19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 USP54Q70EL1 1684 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 PRAMEF22A3QJZ6 481 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 STX6O43752 255 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 GTPBP4Q9BZE4 634 aaKnown RBP19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 SMC3Q9UQE7 1217 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 LARGE1O95461 756 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 UBE2HP62256 183 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 MTX1Q13505 466 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 ADCK5Q3MIX3 580 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 ECHDC1Q9NTX5 307 aa19.82■□□□□ 0.76
PCDHA1-201ENST00000378133 MED1Q15648 1581 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms