RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 VAMP4O75379 141 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 NUTM1Q86Y26 1132 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 KRT222Q8N1A0 295 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 ARID3AQ99856 593 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 SYNJ1O43426 1573 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 RGL2O15211 777 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 GBP2P32456 591 aaPredicted RBP5.73□□□□□ -1.49
PCDH9-201ENST00000377861 CDCA7Q9BWT1 371 aaPredicted RBP5.73□□□□□ -1.49
PCDH9-201ENST00000377861 PDE1AP54750 535 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 TTLL5Q6EMB2 1281 aa5.73□□□□□ -1.49
PCDH9-201ENST00000377861 ZNF165P49910 485 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 TTC22Q5TAA0 569 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 TMX3Q96JJ7 454 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 BBXQ8WY36 941 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SBNO1A3KN83 1393 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 PLEKHG1Q9ULL1 1385 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 ZGPATQ8N5A5 531 aaKnown RBP5.72□□□□□ -1.49
PCDH9-201ENST00000377861 ZNF274Q96GC6 653 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-201ENST00000377861 CEP135Q66GS9 1140 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 MED4Q9NPJ6 270 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 KRT23Q9C075 422 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 C8orf34Q49A92 452 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 APBA1Q02410 837 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 PIBF1Q8WXW3 757 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 RILPL2Q969X0 211 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 TRIM37O94972 964 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SLC4A10Q6U841 1118 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 PRAM1Q96QH2 718 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 ARHGEF10O15013 1369 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 ASXL1Q8IXJ9 1541 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SLC26A4O43511 780 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 NLRP6P59044 892 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 CETN1Q12798 172 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 PRKAR2BP31323 418 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 STX1AQ16623 288 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 P3H4Q92791 437 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SPTY2D1Q68D10 685 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-201ENST00000377861 PPP1R2P3Q6NXS1 205 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 STXBP4Q6ZWJ1 553 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 FBXL16Q8N461 479 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 NUDT16Q96DE0 195 aaKnown RBP5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SWAP70Q9UH65 585 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 NBPF11Q86T75 865 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 GBP6Q6ZN66 633 aa5.72□□□□□ -1.49
PCDH9-201ENST00000377861 SLFNL1Q499Z3 407 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 JAKMIP2Q96AA8 810 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 STK26Q9P289 416 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 PPP2R3AQ06190 1150 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 CUL4AQ13619 759 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 ZNF189O75820 626 aaPredicted RBP5.71□□□□□ -1.49
PCDH9-201ENST00000377861 RILPL1Q5EBL4 403 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 IQCA1Q86XH1 822 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 CNGA4Q8IV77 575 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 RPAP1Q9BWH6 1393 aaPredicted RBP5.71□□□□□ -1.49
PCDH9-201ENST00000377861 HELLSQ9NRZ9 838 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 PLIN1O60240 522 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 MAGEF1Q9HAY2 307 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 PPP1R12BO60237 982 aaPredicted RBP5.71□□□□□ -1.49
PCDH9-201ENST00000377861 CDC25BP30305 580 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 HDGFL1Q5TGJ6 251 aa5.71□□□□□ -1.49
PCDH9-201ENST00000377861 TBC1D9Q6ZT07 1266 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 IL15P40933 162 aaPredicted RBP5.71□□□□□ -1.5
PCDH9-201ENST00000377861 MRFAP1L1Q96HT8 127 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 ME1P48163 572 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 PLCD1P51178 756 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 BIVM-ERCC5R4GMW8 1640 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 BCAR3O75815 825 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 PTPRTO14522 1441 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 ZMYND15Q9H091 742 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 RIC3Q7Z5B4 369 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 ABTB2Q8N961 1025 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 BICD2Q8TD16 824 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 IKBKBO14920 756 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 SRGAP3O43295 1099 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 CCDC155Q8N6L0 562 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 LCMT1Q9UIC8 334 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 A0A1B0GUA9 196 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 SUPT6HQ7KZ85 1726 aaKnown RBP5.71□□□□□ -1.5
PCDH9-201ENST00000377861 A0A087WZG4 1122 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 KIAA0754O94854 1291 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 VWA3BQ502W6 1294 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 DHX32Q7L7V1 743 aaKnown RBP5.71□□□□□ -1.5
PCDH9-201ENST00000377861 RUFY1Q96T51 708 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 GRIN2AQ12879 1464 aa5.71□□□□□ -1.5
PCDH9-201ENST00000377861 LDHCP07864 332 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 BRD3Q15059 726 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 SPA17Q15506 151 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 TMEM87AQ8NBN3 555 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 TSGA10Q9BZW7 698 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 PAFAH1B1P43034 410 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 SEMA3EO15041 775 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 AXDND1Q5T1B0 1012 aaPredicted RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 CKAP4Q07065 602 aaKnown RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 LAD1O00515 517 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 WDR19Q8NEZ3 1342 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 CARMIL3Q8ND23 1372 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 IL17RAQ96F46 866 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms