RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 FLT4P35916 1363 aa27.51■■□□□ 1.99
FOXA2-201ENST00000377115 PRPF40BQ6NWY9 871 aaKnown RBP27.5■■□□□ 1.99
FOXA2-201ENST00000377115 PLEKHG3A1L390 1219 aa27.5■■□□□ 1.99
FOXA2-201ENST00000377115 GOLGA6L6A8MZA4 724 aa27.5■■□□□ 1.99
FOXA2-201ENST00000377115 NECAB1Q8N987 351 aa27.5■■□□□ 1.99
FOXA2-201ENST00000377115 GNAT3A8MTJ3 354 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 NBPF7P0C2Y1 421 aaPredicted RBP27.49■■□□□ 1.99
FOXA2-201ENST00000377115 CAMK4Q16566 473 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 VPS53Q5VIR6 699 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 TOPAZ1Q8N9V7 1692 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 ME3Q16798 604 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 TTC6Q86TZ1 520 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 ANKRD7Q92527 254 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 SBNO1A3KN83 1393 aa27.49■■□□□ 1.99
FOXA2-201ENST00000377115 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 FAM200AQ8TCP9 573 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 U2AF2P26368 475 aaKnown RBP eCLIP27.48■■□□□ 1.99
FOXA2-201ENST00000377115 HDGFL1Q5TGJ6 251 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 LUZP1Q86V48 1076 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 KLHL34Q8N239 644 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 IL17REQ8NFR9 667 aa27.48■■□□□ 1.99
FOXA2-201ENST00000377115 LIG1P18858 919 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 FAM173BQ6P4H8 233 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 MRVI1Q9Y6F6 885 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.47■■□□□ 1.99
FOXA2-201ENST00000377115 MAP3K5Q99683 1374 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 CTIFO43310 598 aaKnown RBP27.47■■□□□ 1.99
FOXA2-201ENST00000377115 AMPHP49418 695 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 FERMT3Q86UX7 667 aa27.47■■□□□ 1.99
FOXA2-201ENST00000377115 CRYBG1Q9Y4K1 1723 aa27.46■■□□□ 1.99
FOXA2-201ENST00000377115 HTATSF1O43719 755 aaKnown RBP27.46■■□□□ 1.99
FOXA2-201ENST00000377115 ZSWIM6Q9HCJ5 1215 aa27.46■■□□□ 1.99
FOXA2-201ENST00000377115 SH2B1Q9NRF2 756 aaPredicted RBP27.46■■□□□ 1.99
FOXA2-201ENST00000377115 CYP46A1Q9Y6A2 500 aa27.46■■□□□ 1.99
FOXA2-201ENST00000377115 TYRO3Q06418 890 aa27.46■■□□□ 1.99
FOXA2-201ENST00000377115 MAP3K11Q16584 847 aa27.45■■□□□ 1.98
FOXA2-201ENST00000377115 ZSCAN31Q96LW9 406 aaPredicted RBP27.45■■□□□ 1.98
FOXA2-201ENST00000377115 NUP62CLQ9H1M0 184 aa27.45■■□□□ 1.98
FOXA2-201ENST00000377115 CDC37L1Q7L3B6 337 aa27.45■■□□□ 1.98
FOXA2-201ENST00000377115 GTPBP4Q9BZE4 634 aaKnown RBP27.44■■□□□ 1.98
FOXA2-201ENST00000377115 LRMPQ12912 555 aa27.43■■□□□ 1.98
FOXA2-201ENST00000377115 COL9A3Q14050 684 aaPredicted RBP27.43■■□□□ 1.98
FOXA2-201ENST00000377115 CKAP2LQ8IYA6 745 aa27.43■■□□□ 1.98
FOXA2-201ENST00000377115 GLRX3O76003 335 aaKnown RBP27.43■■□□□ 1.98
FOXA2-201ENST00000377115 CCDC186Q7Z3E2 898 aa27.43■■□□□ 1.98
FOXA2-201ENST00000377115 TPCN1Q9ULQ1 816 aa27.43■■□□□ 1.98
FOXA2-201ENST00000377115 KRT85P78386 507 aa27.42■■□□□ 1.98
FOXA2-201ENST00000377115 TAF7Q15545 349 aaPredicted RBP27.42■■□□□ 1.98
FOXA2-201ENST00000377115 LARP1BQ659C4 914 aaKnown RBP27.42■■□□□ 1.98
FOXA2-201ENST00000377115 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
FOXA2-201ENST00000377115 OS9Q13438 667 aaPredicted RBP27.42■■□□□ 1.98
FOXA2-201ENST00000377115 USP42Q9H9J4 1324 aaKnown RBP27.42■■□□□ 1.98
FOXA2-201ENST00000377115 RUFY2Q8WXA3 655 aa27.41■■□□□ 1.98
FOXA2-201ENST00000377115 TM6SF1Q9BZW5 370 aa27.41■■□□□ 1.98
FOXA2-201ENST00000377115 NRBP1Q9UHY1 535 aa27.41■■□□□ 1.98
FOXA2-201ENST00000377115 PPP6R1Q9UPN7 881 aa27.41■■□□□ 1.98
FOXA2-201ENST00000377115 EIF2S2P20042 333 aaKnown RBP27.41■■□□□ 1.98
FOXA2-201ENST00000377115 TTC41PQ6P2S7 1318 aa27.41■■□□□ 1.98
FOXA2-201ENST00000377115 ANO6Q4KMQ2 910 aa27.4■■□□□ 1.98
FOXA2-201ENST00000377115 C16orf45Q96MC5 204 aaPredicted RBP27.4■■□□□ 1.98
FOXA2-201ENST00000377115 CBX8Q9HC52 389 aa27.4■■□□□ 1.98
FOXA2-201ENST00000377115 DACT1Q9NYF0 836 aa27.4■■□□□ 1.98
FOXA2-201ENST00000377115 NCBP1Q09161 790 aaKnown RBP27.39■■□□□ 1.98
FOXA2-201ENST00000377115 NECTIN1Q15223 517 aa27.39■■□□□ 1.98
FOXA2-201ENST00000377115 KCNB2Q92953 911 aa27.39■■□□□ 1.98
FOXA2-201ENST00000377115 TNMDQ9H2S6 317 aa27.39■■□□□ 1.97
FOXA2-201ENST00000377115 DRC7Q8IY82 874 aa27.38■■□□□ 1.97
FOXA2-201ENST00000377115 BEND3Q5T5X7 828 aa27.38■■□□□ 1.97
FOXA2-201ENST00000377115 CCDC171Q6TFL3 1326 aa27.38■■□□□ 1.97
FOXA2-201ENST00000377115 RBM8AQ9Y5S9 174 aaKnown RBP27.37■■□□□ 1.97
FOXA2-201ENST00000377115 ELP1O95163 1332 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 AGLP35573 1532 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 PI4KAP2A4QPH2 592 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 HSP90AB4PQ58FF6 505 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 CREB3L3Q68CJ9 461 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 PI4KAP1Q8N8J0 262 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 TCEANC2Q96MN5 208 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 TTC21AQ8NDW8 1320 aa27.37■■□□□ 1.97
FOXA2-201ENST00000377115 TFIP11Q9UBB9 837 aaKnown RBP27.36■■□□□ 1.97
FOXA2-201ENST00000377115 ZKSCAN1P17029 563 aaPredicted RBP27.36■■□□□ 1.97
FOXA2-201ENST00000377115 CLASRPQ8N2M8 674 aaKnown RBP27.36■■□□□ 1.97
FOXA2-201ENST00000377115 DNAAF4Q8WXU2 420 aa27.36■■□□□ 1.97
FOXA2-201ENST00000377115 ECHDC1Q9NTX5 307 aa27.36■■□□□ 1.97
FOXA2-201ENST00000377115 IGSF3O75054 1194 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 TRIM5Q9C035 493 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 CHPF2Q9P2E5 772 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 KCNJ4P48050 445 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 ZSCAN25Q6NSZ9 544 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 FAM227BQ96M60 508 aa27.35■■□□□ 1.97
FOXA2-201ENST00000377115 ANXA1P04083 346 aa27.34■■□□□ 1.97
FOXA2-201ENST00000377115 ZNF75DP51815 510 aa27.34■■□□□ 1.97
FOXA2-201ENST00000377115 PLA2G4DQ86XP0 818 aa27.34■■□□□ 1.97
FOXA2-201ENST00000377115 LTV1Q96GA3 475 aaPredicted RBP27.33■■□□□ 1.97
FOXA2-201ENST00000377115 HDGFP51858 240 aaKnown RBP27.33■■□□□ 1.97
FOXA2-201ENST00000377115 SPATA32Q96LK8 384 aa27.33■■□□□ 1.97
FOXA2-201ENST00000377115 PA2G4Q9UQ80 394 aaKnown RBP27.33■■□□□ 1.97
FOXA2-201ENST00000377115 GOLGA6L4A6NEF3 574 aa27.32■■□□□ 1.96
FOXA2-201ENST00000377115 KIF20AO95235 890 aa27.32■■□□□ 1.96
FOXA2-201ENST00000377115 TNNT1P13805 278 aa27.32■■□□□ 1.96
FOXA2-201ENST00000377115 NAA30Q147X3 362 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms