RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 KLRG1Q96E93 195 aa30.87■■■□□ 2.53
C9orf47-202ENST00000375850 MASTLQ96GX5 879 aa30.86■■■□□ 2.53
C9orf47-202ENST00000375850 ANKRD31Q8N7Z5 1873 aa30.85■■■□□ 2.53
C9orf47-202ENST00000375850 SRGNP10124 158 aa30.85■■■□□ 2.53
C9orf47-202ENST00000375850 TAF7Q15545 349 aaPredicted RBP30.85■■■□□ 2.53
C9orf47-202ENST00000375850 NBPF5PQ86XG9 351 aaPredicted RBP30.84■■■□□ 2.53
C9orf47-202ENST00000375850 TAOK3Q9H2K8 898 aa30.84■■■□□ 2.53
C9orf47-202ENST00000375850 ERFEQ4G0M1 354 aa30.83■■■□□ 2.53
C9orf47-202ENST00000375850 CCDC24Q8N4L8 307 aa30.83■■■□□ 2.53
C9orf47-202ENST00000375850 BCORQ6W2J9 1755 aa30.83■■■□□ 2.53
C9orf47-202ENST00000375850 PNISRQ8TF01 805 aaKnown RBP30.82■■■□□ 2.52
C9orf47-202ENST00000375850 PRPF40BQ6NWY9 871 aaKnown RBP30.81■■■□□ 2.52
C9orf47-202ENST00000375850 TPTE2Q6XPS3 522 aa30.81■■■□□ 2.52
C9orf47-202ENST00000375850 JMYQ8N9B5 988 aa30.81■■■□□ 2.52
C9orf47-202ENST00000375850 TIAM2Q8IVF5 1701 aa30.81■■■□□ 2.52
C9orf47-202ENST00000375850 PRAMEF22A3QJZ6 481 aa30.8■■■□□ 2.52
C9orf47-202ENST00000375850 COL11A2P13942 1736 aaPredicted RBP30.79■■■□□ 2.52
C9orf47-202ENST00000375850 DCTN1Q14203 1278 aa30.79■■■□□ 2.52
C9orf47-202ENST00000375850 ZNF219Q9P2Y4 722 aaPredicted RBP30.79■■■□□ 2.52
C9orf47-202ENST00000375850 PIP4K2AP48426 406 aaPredicted RBP30.78■■■□□ 2.52
C9orf47-202ENST00000375850 KLRG2A4D1S0 409 aaPredicted RBP30.77■■■□□ 2.52
C9orf47-202ENST00000375850 NBPF26B4DH59 902 aa30.77■■■□□ 2.52
C9orf47-202ENST00000375850 NPR1P16066 1061 aa30.77■■■□□ 2.52
C9orf47-202ENST00000375850 NBPF10Q6P3W6 841 aaKnown RBP30.77■■■□□ 2.52
C9orf47-202ENST00000375850 NBPF15Q8N660 670 aa30.77■■■□□ 2.52
C9orf47-202ENST00000375850 PNNQ9H307 717 aaKnown RBP30.77■■■□□ 2.52
C9orf47-202ENST00000375850 NIP7Q9Y221 180 aaKnown RBP eCLIP30.77■■■□□ 2.52
C9orf47-202ENST00000375850 FER1L6Q2WGJ9 1857 aa30.76■■■□□ 2.51
C9orf47-202ENST00000375850 HTRA3P83110 453 aa30.75■■■□□ 2.51
C9orf47-202ENST00000375850 CCDC93Q567U6 631 aa30.74■■■□□ 2.51
C9orf47-202ENST00000375850 POTECB2RU33 542 aa30.73■■■□□ 2.51
C9orf47-202ENST00000375850 C7orf43Q8WVR3 580 aa30.72■■■□□ 2.51
C9orf47-202ENST00000375850 ARFGEF2Q9Y6D5 1785 aa30.71■■■□□ 2.51
C9orf47-202ENST00000375850 CCDC88AQ3V6T2 1871 aa30.7■■■□□ 2.51
C9orf47-202ENST00000375850 ERVV-1B6SEH8 477 aa30.7■■■□□ 2.51
C9orf47-202ENST00000375850 ALDH1B1P30837 517 aa30.7■■■□□ 2.51
C9orf47-202ENST00000375850 DICER1Q9UPY3 1922 aaKnown RBP30.7■■■□□ 2.51
C9orf47-202ENST00000375850 SLX4Q8IY92 1834 aa30.69■■■□□ 2.5
C9orf47-202ENST00000375850 GTF2E1P29083 439 aaPredicted RBP30.69■■■□□ 2.5
C9orf47-202ENST00000375850 NFE2L2Q16236 605 aa30.69■■■□□ 2.5
C9orf47-202ENST00000375850 RTKN2Q8IZC4 609 aa30.69■■■□□ 2.5
C9orf47-202ENST00000375850 PLEKHF1Q96S99 279 aa30.69■■■□□ 2.5
C9orf47-202ENST00000375850 NYXQ9GZU5 481 aa30.69■■■□□ 2.5
C9orf47-202ENST00000375850 IQCA1LA6NCM1 817 aa30.68■■■□□ 2.5
C9orf47-202ENST00000375850 MIS18AQ9NYP9 233 aa30.68■■■□□ 2.5
C9orf47-202ENST00000375850 FKBP4Q02790 459 aaKnown RBP eCLIP30.67■■■□□ 2.5
C9orf47-202ENST00000375850 MAPK8IP3Q9UPT6 1336 aa30.67■■■□□ 2.5
C9orf47-202ENST00000375850 EIF4A1P60842 406 aaKnown RBP30.66■■■□□ 2.5
C9orf47-202ENST00000375850 HLFQ16534 295 aa30.66■■■□□ 2.5
C9orf47-202ENST00000375850 LAMB4A4D0S4 1761 aa30.66■■■□□ 2.5
C9orf47-202ENST00000375850 CHADLQ6NUI6 762 aa30.65■■■□□ 2.5
C9orf47-202ENST00000375850 DDNO94850 711 aaPredicted RBP30.64■■■□□ 2.5
C9orf47-202ENST00000375850 KIF6Q6ZMV9 814 aa30.64■■■□□ 2.5
C9orf47-202ENST00000375850 L3MBTL3Q96JM7 780 aaPredicted RBP30.64■■■□□ 2.5
C9orf47-202ENST00000375850 ERBB4Q15303 1308 aa30.64■■■□□ 2.5
C9orf47-202ENST00000375850 MAP3K15Q6ZN16 1313 aa30.64■■■□□ 2.5
C9orf47-202ENST00000375850 IBTKQ9P2D0 1353 aaPredicted RBP30.63■■■□□ 2.49
C9orf47-202ENST00000375850 FAM177BA6PVY3 158 aa30.61■■■□□ 2.49
C9orf47-202ENST00000375850 CRY2Q49AN0 593 aa30.61■■■□□ 2.49
C9orf47-202ENST00000375850 CC2D2BQ6DHV5 1058 aa30.61■■■□□ 2.49
C9orf47-202ENST00000375850 KDM3BQ7LBC6 1761 aa30.61■■■□□ 2.49
C9orf47-202ENST00000375850 RIC1Q4ADV7 1423 aa30.6■■■□□ 2.49
C9orf47-202ENST00000375850 GRIPAP1Q4V328 841 aa30.59■■■□□ 2.49
C9orf47-202ENST00000375850 RRP7AQ9Y3A4 280 aaKnown RBP30.59■■■□□ 2.49
C9orf47-202ENST00000375850 LDHDQ86WU2 507 aa30.58■■■□□ 2.49
C9orf47-202ENST00000375850 NGEFQ8N5V2 710 aa30.58■■■□□ 2.49
C9orf47-202ENST00000375850 CREBZFQ9NS37 354 aa30.58■■■□□ 2.49
C9orf47-202ENST00000375850 PSMD1Q99460 953 aa30.57■■■□□ 2.48
C9orf47-202ENST00000375850 BABAM1Q9NWV8 329 aa30.57■■■□□ 2.48
C9orf47-202ENST00000375850 CACNA1SQ13698 1873 aa30.57■■■□□ 2.48
C9orf47-202ENST00000375850 ZNF277Q9NRM2 450 aaPredicted RBP30.56■■■□□ 2.48
C9orf47-202ENST00000375850 IARSP41252 1262 aaKnown RBP30.55■■■□□ 2.48
C9orf47-202ENST00000375850 RALBP1Q15311 655 aa30.55■■■□□ 2.48
C9orf47-202ENST00000375850 TTLL7Q6ZT98 887 aa30.55■■■□□ 2.48
C9orf47-202ENST00000375850 THUMPD2Q9BTF0 503 aaKnown RBP30.55■■■□□ 2.48
C9orf47-202ENST00000375850 TAF1DQ9H5J8 278 aaPredicted RBP30.55■■■□□ 2.48
C9orf47-202ENST00000375850 DLG5Q8TDM6 1919 aa30.55■■■□□ 2.48
C9orf47-202ENST00000375850 MYL6BP14649 208 aa30.54■■■□□ 2.48
C9orf47-202ENST00000375850 HOXA10P31260 410 aaPredicted RBP30.54■■■□□ 2.48
C9orf47-202ENST00000375850 LMOD3Q0VAK6 560 aa30.54■■■□□ 2.48
C9orf47-202ENST00000375850 RPGRQ92834 1020 aaKnown RBP30.54■■■□□ 2.48
C9orf47-202ENST00000375850 ABCC12Q96J65 1359 aa30.54■■■□□ 2.48
C9orf47-202ENST00000375850 SYNE4Q8N205 404 aa30.53■■■□□ 2.48
C9orf47-202ENST00000375850 TSPYL4Q9UJ04 414 aa30.53■■■□□ 2.48
C9orf47-202ENST00000375850 SCN4AP35499 1836 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 FZD9O00144 591 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 PARP10Q53GL7 1025 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 GIGYF2Q6Y7W6 1299 aaKnown RBP30.52■■■□□ 2.48
C9orf47-202ENST00000375850 NUTM1Q86Y26 1132 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 ZNF34Q8IZ26 560 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 JDP2Q8WYK2 163 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 HACL1Q9UJ83 578 aa30.52■■■□□ 2.48
C9orf47-202ENST00000375850 PPP1R42Q7Z4L9 355 aa30.51■■■□□ 2.47
C9orf47-202ENST00000375850 ZBTB3Q9H5J0 574 aa30.51■■■□□ 2.47
C9orf47-202ENST00000375850 UBN2Q6ZU65 1347 aa30.5■■■□□ 2.47
C9orf47-202ENST00000375850 POTEIP0CG38 1075 aa30.5■■■□□ 2.47
C9orf47-202ENST00000375850 POTEJP0CG39 1038 aa30.5■■■□□ 2.47
C9orf47-202ENST00000375850 COL13A1Q5TAT6 717 aaPredicted RBP30.5■■■□□ 2.47
C9orf47-202ENST00000375850 OLFM4Q6UX06 510 aa30.5■■■□□ 2.47
C9orf47-202ENST00000375850 PNMA8AQ86V59 439 aaPredicted RBP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms