RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 CALML4Q96GE6 196 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 ZNF213O14771 459 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 STMN4Q9H169 189 aaPredicted RBP11.3□□□□□ -0.6
SPEN-201ENST00000375759 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
SPEN-201ENST00000375759 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 MKNK2Q9HBH9 465 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
SPEN-201ENST00000375759 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.64e-9■■■□□ 17.6
SPEN-201ENST00000375759 PTPRCP08575 1304 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
SPEN-201ENST00000375759 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 GJB2P29033 226 aa11.3□□□□□ -0.6
SPEN-201ENST00000375759 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 OPA1O60313 960 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
SPEN-201ENST00000375759 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 KIAA0753Q2KHM9 967 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 BOLA2Q9H3K6 86 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 ABCF2Q9UG63 623 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 CAVIN4Q5BKX8 364 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 HMGB2P26583 209 aaKnown RBP11.29□□□□□ -0.6
SPEN-201ENST00000375759 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 DAAM2Q86T65 1068 aa11.29□□□□□ -0.6
SPEN-201ENST00000375759 CTAGE9A4FU28 777 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 SELENOOQ9BVL4 669 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 STRN4Q9NRL3 753 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 STARD3NLO95772 234 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 RASAL2Q9UJF2 1139 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 CUL5Q93034 780 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
SPEN-201ENST00000375759 TBC1D32Q96NH3 1257 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 UBASH3AP57075 661 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 RPGRIP1LQ68CZ1 1315 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 KIF4AO95239 1232 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 KIF5BP33176 963 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 CCDC6Q16204 474 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
SPEN-201ENST00000375759 ACTN2P35609 894 aa11.27□□□□□ -0.6
SPEN-201ENST00000375759 GUCY1B3Q02153 619 aa11.27□□□□□ -0.6
SPEN-201ENST00000375759 TTC14Q96N46 770 aa11.27□□□□□ -0.6
SPEN-201ENST00000375759 SMARCA5O60264 1052 aaPredicted RBP11.27□□□□□ -0.6
SPEN-201ENST00000375759 NOLC1Q14978 699 aaKnown RBP eCLIP11.27□□□□□ -0.6
SPEN-201ENST00000375759 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.6
SPEN-201ENST00000375759 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.6
SPEN-201ENST00000375759 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.6
SPEN-201ENST00000375759 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 CTAGE8P0CG41 777 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 CYLC1P35663 651 aaPredicted RBP11.27□□□□□ -0.61
SPEN-201ENST00000375759 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 CTAGE4Q8IX94 777 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 BIN1O00499 593 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 NLRP5P59047 1200 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 ARAP1Q96P48 1450 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
SPEN-201ENST00000375759 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 PRPHP41219 470 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
SPEN-201ENST00000375759 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
SPEN-201ENST00000375759 FAM135AQ9P2D6 1515 aa11.27□□□□□ -0.61
SPEN-201ENST00000375759 TTC12Q9H892 705 aaPredicted RBP11.26□□□□□ -0.61
SPEN-201ENST00000375759 MCM6Q14566 821 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
SPEN-201ENST00000375759 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
SPEN-201ENST00000375759 NBPF8Q3BBV2 869 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 TBC1D5Q92609 795 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
SPEN-201ENST00000375759 TUBBP07437 444 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 RSPH14Q9UHP6 348 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 SKILP12757 684 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms