RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RRP7AQ9Y3A4 280 aaKnown RBP18.75■□□□□ 0.59
NELFE-201ENST00000375425 RGL2O15211 777 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 C21orf2O43822 256 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 SRGNP10124 158 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 PRELPP51888 382 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 TPTE2Q6XPS3 522 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 NFKBIEO00221 500 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
NELFE-201ENST00000375425 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
NELFE-201ENST00000375425 KDM2BQ8NHM5 1336 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 FAM177BA6PVY3 158 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 MYL6BP14649 208 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 STYK1Q6J9G0 422 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 RRAGCQ9HB90 399 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 DLG5Q8TDM6 1919 aa18.73■□□□□ 0.59
NELFE-201ENST00000375425 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
NELFE-201ENST00000375425 ERVV-1B6SEH8 477 aa18.71■□□□□ 0.59
NELFE-201ENST00000375425 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
NELFE-201ENST00000375425 ANKRD31Q8N7Z5 1873 aa18.7■□□□□ 0.58
NELFE-201ENST00000375425 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
NELFE-201ENST00000375425 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
NELFE-201ENST00000375425 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
NELFE-201ENST00000375425 TTLL7Q6ZT98 887 aa18.7■□□□□ 0.58
NELFE-201ENST00000375425 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
NELFE-201ENST00000375425 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
NELFE-201ENST00000375425 DLEC1Q9Y238 1755 aa18.7■□□□□ 0.58
NELFE-201ENST00000375425 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
NELFE-201ENST00000375425 KLRG2A4D1S0 409 aaPredicted RBP18.69■□□□□ 0.58
NELFE-201ENST00000375425 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
NELFE-201ENST00000375425 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
NELFE-201ENST00000375425 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
NELFE-201ENST00000375425 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
NELFE-201ENST00000375425 SBF1O95248 1867 aa18.69■□□□□ 0.58
NELFE-201ENST00000375425 GLTPD2A6NH11 291 aa18.68■□□□□ 0.58
NELFE-201ENST00000375425 NPR1P16066 1061 aa18.68■□□□□ 0.58
NELFE-201ENST00000375425 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
NELFE-201ENST00000375425 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
NELFE-201ENST00000375425 RBM46Q8TBY0 533 aaKnown RBP18.67■□□□□ 0.58
NELFE-201ENST00000375425 ZBTB3Q9H5J0 574 aa18.67■□□□□ 0.58
NELFE-201ENST00000375425 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
NELFE-201ENST00000375425 KDM3BQ7LBC6 1761 aa18.67■□□□□ 0.58
NELFE-201ENST00000375425 ERFEQ4G0M1 354 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 C7orf43Q8WVR3 580 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 TAOK3Q9H2K8 898 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 PRKRIP1Q9H875 184 aaPredicted RBP18.66■□□□□ 0.58
NELFE-201ENST00000375425 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 GPTP24298 496 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 PDIA6Q15084 440 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
NELFE-201ENST00000375425 COL11A2P13942 1736 aaPredicted RBP18.65■□□□□ 0.58
NELFE-201ENST00000375425 APLP1P51693 650 aa18.65■□□□□ 0.58
NELFE-201ENST00000375425 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
NELFE-201ENST00000375425 CHL1O00533 1208 aa18.64■□□□□ 0.57
NELFE-201ENST00000375425 VEGFAP15692 232 aaPredicted RBP18.64■□□□□ 0.57
NELFE-201ENST00000375425 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
NELFE-201ENST00000375425 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
NELFE-201ENST00000375425 LRP10Q7Z4F1 713 aa18.64■□□□□ 0.57
NELFE-201ENST00000375425 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
NELFE-201ENST00000375425 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 ANXA1P04083 346 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 FSTL1Q12841 308 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 SLX4Q8IY92 1834 aa18.63■□□□□ 0.57
NELFE-201ENST00000375425 UBN2Q6ZU65 1347 aa18.62■□□□□ 0.57
NELFE-201ENST00000375425 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
NELFE-201ENST00000375425 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
NELFE-201ENST00000375425 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
NELFE-201ENST00000375425 OLFM4Q6UX06 510 aa18.61■□□□□ 0.57
NELFE-201ENST00000375425 POTECB2RU33 542 aa18.6■□□□□ 0.57
NELFE-201ENST00000375425 CRY2Q49AN0 593 aa18.6■□□□□ 0.57
NELFE-201ENST00000375425 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
NELFE-201ENST00000375425 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
NELFE-201ENST00000375425 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
NELFE-201ENST00000375425 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.57
NELFE-201ENST00000375425 RTKN2Q8IZC4 609 aa18.58■□□□□ 0.57
NELFE-201ENST00000375425 DNAJC5GQ8N7S2 189 aa18.58■□□□□ 0.57
NELFE-201ENST00000375425 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.57
NELFE-201ENST00000375425 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.57
NELFE-201ENST00000375425 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.56
NELFE-201ENST00000375425 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
NELFE-201ENST00000375425 NTSR2O95665 410 aa18.57■□□□□ 0.56
NELFE-201ENST00000375425 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
NELFE-201ENST00000375425 PARP10Q53GL7 1025 aa18.57■□□□□ 0.56
NELFE-201ENST00000375425 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
NELFE-201ENST00000375425 ZNF277Q9NRM2 450 aaPredicted RBP18.57■□□□□ 0.56
NELFE-201ENST00000375425 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
NELFE-201ENST00000375425 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
NELFE-201ENST00000375425 CFAP44Q96MT7 982 aa18.57■□□□□ 0.56
NELFE-201ENST00000375425 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
NELFE-201ENST00000375425 NUP98P52948 1817 aa18.57■□□□□ 0.56
NELFE-201ENST00000375425 PCNTO95613 3336 aa18.56■□□□□ 0.56
NELFE-201ENST00000375425 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms