RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 JCADQ9P266 1359 aa17.19■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 MYD88Q99836 296 aa17.19■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 APBB1O00213 710 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 STARD3NLO95772 234 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 A1BGP04217 495 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 DDB1Q16531 1140 aa17.18■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 SDSP20132 328 aa17.17■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 MX1P20591 662 aa17.17■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 CASP7P55210 303 aa17.16■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 H7C1W4 665 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 TTLL7Q6ZT98 887 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 VPS72Q15906 364 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 BECN1Q14457 450 aa17.13■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 ISCA1Q9BUE6 129 aa17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 A0A087WZG4 1122 aa17.11■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 ITGB4P16144 1822 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
NIPSNAP3A-201ENST00000374767 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 NGLY1Q96IV0 654 aa17.08■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 SASH1O94885 1247 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 FOXO4P98177 505 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 USP26Q9BXU7 913 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 REC8O95072 547 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 SNX21Q969T3 373 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 KIF2CQ99661 725 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 ZBTB3Q9H5J0 574 aa17.07■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 ERC2O15083 957 aa17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 TBC1D2Q9BYX2 928 aa17.05■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 CHMLP26374 656 aa17.04■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 PCCAP05165 728 aaPredicted RBP17.03■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
NIPSNAP3A-201ENST00000374767 LMBR1LQ6UX01 489 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms