RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 BCL2L12Q9HB09 334 aa24.4■■□□□ 1.5
COL16A1-201ENST00000373667 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
COL16A1-201ENST00000373667 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.49
COL16A1-201ENST00000373667 MAP3K15Q6ZN16 1313 aa24.38■■□□□ 1.49
COL16A1-201ENST00000373667 MMP10P09238 476 aa24.38■■□□□ 1.49
COL16A1-201ENST00000373667 PPP1R1BQ9UD71 204 aaPredicted RBP24.38■■□□□ 1.49
COL16A1-201ENST00000373667 ZNF652Q9Y2D9 606 aa24.38■■□□□ 1.49
COL16A1-201ENST00000373667 PTGER2P43116 358 aa24.37■■□□□ 1.49
COL16A1-201ENST00000373667 HLFQ16534 295 aa24.37■■□□□ 1.49
COL16A1-201ENST00000373667 ERVV-1B6SEH8 477 aa24.36■■□□□ 1.49
COL16A1-201ENST00000373667 TBC1D9BQ66K14 1250 aa24.35■■□□□ 1.49
COL16A1-201ENST00000373667 CLEC4GQ6UXB4 293 aa24.35■■□□□ 1.49
COL16A1-201ENST00000373667 ANKRD13DQ6ZTN6 518 aa24.35■■□□□ 1.49
COL16A1-201ENST00000373667 SGIP1Q9BQI5 828 aa24.35■■□□□ 1.49
COL16A1-201ENST00000373667 PARP3Q9Y6F1 533 aa24.35■■□□□ 1.49
COL16A1-201ENST00000373667 TM4SF1P30408 202 aa24.34■■□□□ 1.49
COL16A1-201ENST00000373667 NFIXQ14938 502 aa24.34■■□□□ 1.49
COL16A1-201ENST00000373667 G2E3Q7L622 706 aa24.34■■□□□ 1.49
COL16A1-201ENST00000373667 RIC3Q7Z5B4 369 aa24.33■■□□□ 1.49
COL16A1-201ENST00000373667 SETDB2Q96T68 719 aa24.33■■□□□ 1.49
COL16A1-201ENST00000373667 DDX58O95786 925 aaKnown RBP24.32■■□□□ 1.48
COL16A1-201ENST00000373667 CT47B1P0C2W7 299 aaPredicted RBP24.32■■□□□ 1.48
COL16A1-201ENST00000373667 GIGYF2Q6Y7W6 1299 aaKnown RBP24.32■■□□□ 1.48
COL16A1-201ENST00000373667 KLHL34Q8N239 644 aa24.32■■□□□ 1.48
COL16A1-201ENST00000373667 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
COL16A1-201ENST00000373667 SSH1Q8WYL5 1049 aa24.31■■□□□ 1.48
COL16A1-201ENST00000373667 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
COL16A1-201ENST00000373667 BCL2L13Q9BXK5 485 aa24.31■■□□□ 1.48
COL16A1-201ENST00000373667 NIP7Q9Y221 180 aaKnown RBP eCLIP24.31■■□□□ 1.48
COL16A1-201ENST00000373667 SCN7AQ01118 1682 aa24.3■■□□□ 1.48
COL16A1-201ENST00000373667 BCORQ6W2J9 1755 aa24.3■■□□□ 1.48
COL16A1-201ENST00000373667 GPTP24298 496 aa24.3■■□□□ 1.48
COL16A1-201ENST00000373667 DDR1Q08345 913 aa24.3■■□□□ 1.48
COL16A1-201ENST00000373667 FLIIQ13045 1269 aa24.3■■□□□ 1.48
COL16A1-201ENST00000373667 FAM177BA6PVY3 158 aa24.29■■□□□ 1.48
COL16A1-201ENST00000373667 RGL2O15211 777 aa24.29■■□□□ 1.48
COL16A1-201ENST00000373667 SERPINB2P05120 415 aa24.29■■□□□ 1.48
COL16A1-201ENST00000373667 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
COL16A1-201ENST00000373667 SMC4Q9NTJ3 1288 aa24.29■■□□□ 1.48
COL16A1-201ENST00000373667 NUP98P52948 1817 aa24.28■■□□□ 1.48
COL16A1-201ENST00000373667 COL24A1Q17RW2 1714 aa24.28■■□□□ 1.48
COL16A1-201ENST00000373667 POLRMTO00411 1230 aaKnown RBP24.28■■□□□ 1.48
COL16A1-201ENST00000373667 FKBP5Q13451 457 aaPredicted RBP24.28■■□□□ 1.48
COL16A1-201ENST00000373667 ALDH1L2Q3SY69 923 aa24.28■■□□□ 1.48
COL16A1-201ENST00000373667 NPHP1O15259 732 aa24.27■■□□□ 1.48
COL16A1-201ENST00000373667 HSP90AB3PQ58FF7 597 aa24.27■■□□□ 1.48
COL16A1-201ENST00000373667 KSR2Q6VAB6 950 aa24.27■■□□□ 1.48
COL16A1-201ENST00000373667 CACNA1FO60840 1977 aa24.27■■□□□ 1.48
COL16A1-201ENST00000373667 PI4KAP2A4QPH2 592 aa24.26■■□□□ 1.47
COL16A1-201ENST00000373667 TCIRG1Q13488 830 aa24.26■■□□□ 1.47
COL16A1-201ENST00000373667 PI4KAP1Q8N8J0 262 aa24.26■■□□□ 1.47
COL16A1-201ENST00000373667 MAP3K2Q9Y2U5 619 aa24.26■■□□□ 1.47
COL16A1-201ENST00000373667 LRP5O75197 1615 aa24.25■■□□□ 1.47
COL16A1-201ENST00000373667 RARSP54136 660 aaKnown RBP24.25■■□□□ 1.47
COL16A1-201ENST00000373667 ZNF34Q8IZ26 560 aa24.25■■□□□ 1.47
COL16A1-201ENST00000373667 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
COL16A1-201ENST00000373667 NBPF5PQ86XG9 351 aaPredicted RBP24.24■■□□□ 1.47
COL16A1-201ENST00000373667 MYD88Q99836 296 aa24.24■■□□□ 1.47
COL16A1-201ENST00000373667 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
COL16A1-201ENST00000373667 GTF2E1P29083 439 aaPredicted RBP24.22■■□□□ 1.47
COL16A1-201ENST00000373667 CCDC24Q8N4L8 307 aa24.22■■□□□ 1.47
COL16A1-201ENST00000373667 METTL22Q9BUU2 404 aaPredicted RBP24.22■■□□□ 1.47
COL16A1-201ENST00000373667 FHDC1Q9C0D6 1143 aaPredicted RBP24.22■■□□□ 1.47
COL16A1-201ENST00000373667 ATP10DQ9P241 1426 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 ADCY9O60503 1353 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 NEXNQ0ZGT2 675 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 PARP10Q53GL7 1025 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 SUSD4Q5VX71 490 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 TPTE2Q6XPS3 522 aa24.21■■□□□ 1.47
COL16A1-201ENST00000373667 UBN2Q6ZU65 1347 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 F6X3S4 739 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 DNAAF4Q8WXU2 420 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 ARFGEF2Q9Y6D5 1785 aa24.2■■□□□ 1.46
COL16A1-201ENST00000373667 BCAR3O75815 825 aa24.19■■□□□ 1.46
COL16A1-201ENST00000373667 PRR5LQ6MZQ0 368 aa24.19■■□□□ 1.46
COL16A1-201ENST00000373667 NLRP10Q86W26 655 aa24.19■■□□□ 1.46
COL16A1-201ENST00000373667 ISCA1Q9BUE6 129 aa24.19■■□□□ 1.46
COL16A1-201ENST00000373667 NOB1Q9ULX3 412 aaKnown RBP24.19■■□□□ 1.46
COL16A1-201ENST00000373667 AFDNP55196 1824 aaKnown RBP24.19■■□□□ 1.46
COL16A1-201ENST00000373667 ST5P78524 1137 aa24.18■■□□□ 1.46
COL16A1-201ENST00000373667 SLC4A10Q6U841 1118 aa24.18■■□□□ 1.46
COL16A1-201ENST00000373667 UTP14AQ9BVJ6 771 aaKnown RBP24.18■■□□□ 1.46
COL16A1-201ENST00000373667 CD2APQ9Y5K6 639 aa24.18■■□□□ 1.46
COL16A1-201ENST00000373667 PTPRCP08575 1304 aa24.17■■□□□ 1.46
COL16A1-201ENST00000373667 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
COL16A1-201ENST00000373667 SYT17Q9BSW7 474 aa24.17■■□□□ 1.46
COL16A1-201ENST00000373667 TRMT112Q9UI30 125 aaKnown RBP24.17■■□□□ 1.46
COL16A1-201ENST00000373667 ANKRD36CQ5JPF3 1778 aa24.16■■□□□ 1.46
COL16A1-201ENST00000373667 FRAT1Q92837 279 aaPredicted RBP24.16■■□□□ 1.46
COL16A1-201ENST00000373667 TRIM28Q13263 835 aaKnown RBP24.15■■□□□ 1.46
COL16A1-201ENST00000373667 ERFEQ4G0M1 354 aa24.15■■□□□ 1.46
COL16A1-201ENST00000373667 NTSR2O95665 410 aa24.14■■□□□ 1.45
COL16A1-201ENST00000373667 BRPF1P55201 1214 aaPredicted RBP24.14■■□□□ 1.45
COL16A1-201ENST00000373667 CWF19L2Q2TBE0 894 aaKnown RBP24.14■■□□□ 1.45
COL16A1-201ENST00000373667 CCDC191Q8NCU4 936 aa24.14■■□□□ 1.45
COL16A1-201ENST00000373667 CWC25Q9NXE8 425 aaPredicted RBP24.14■■□□□ 1.45
COL16A1-201ENST00000373667 IGKV5-2P06315 115 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms