RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 NBPF15Q8N660 670 aa24.1■■□□□ 1.45
HDAC1-201ENST00000373548 PLCH1Q4KWH8 1693 aa24.09■■□□□ 1.45
HDAC1-201ENST00000373548 NUTM1Q86Y26 1132 aa24.08■■□□□ 1.45
HDAC1-201ENST00000373548 BICC1Q9H694 974 aaKnown RBP24.08■■□□□ 1.45
HDAC1-201ENST00000373548 PTCD1O75127 700 aaKnown RBP24.08■■□□□ 1.45
HDAC1-201ENST00000373548 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
HDAC1-201ENST00000373548 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
HDAC1-201ENST00000373548 PLBD2Q8NHP8 589 aa24.07■■□□□ 1.44
HDAC1-201ENST00000373548 TMOD3Q9NYL9 352 aa24.07■■□□□ 1.44
HDAC1-201ENST00000373548 ITGB4P16144 1822 aa24.07■■□□□ 1.44
HDAC1-201ENST00000373548 SNX21Q969T3 373 aa24.06■■□□□ 1.44
HDAC1-201ENST00000373548 USP26Q9BXU7 913 aa24.06■■□□□ 1.44
HDAC1-201ENST00000373548 SLKQ9H2G2 1235 aaPredicted RBP24.06■■□□□ 1.44
HDAC1-201ENST00000373548 ANTXR1Q9H6X2 564 aa24.06■■□□□ 1.44
HDAC1-201ENST00000373548 WNK3Q9BYP7 1800 aa24.06■■□□□ 1.44
HDAC1-201ENST00000373548 PA2G4Q9UQ80 394 aaKnown RBP24.05■■□□□ 1.44
HDAC1-201ENST00000373548 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
HDAC1-201ENST00000373548 OS9Q13438 667 aaPredicted RBP24.05■■□□□ 1.44
HDAC1-201ENST00000373548 HSCBQ8IWL3 235 aa24.05■■□□□ 1.44
HDAC1-201ENST00000373548 A1BGP04217 495 aa24.04■■□□□ 1.44
HDAC1-201ENST00000373548 NFKBIBQ15653 356 aa24.04■■□□□ 1.44
HDAC1-201ENST00000373548 AK9Q5TCS8 1911 aa24.03■■□□□ 1.44
HDAC1-201ENST00000373548 ERC2O15083 957 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 PI4K2BQ8TCG2 481 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 TRIM6-TRIM34B2RNG4 842 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 EPHA10Q5JZY3 1008 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 PIGBQ92521 554 aa24.02■■□□□ 1.44
HDAC1-201ENST00000373548 ATP5J2-PTCD1G3V325 749 aa24.01■■□□□ 1.43
HDAC1-201ENST00000373548 REC8O95072 547 aa24.01■■□□□ 1.43
HDAC1-201ENST00000373548 TTLL7Q6ZT98 887 aa24.01■■□□□ 1.43
HDAC1-201ENST00000373548 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
HDAC1-201ENST00000373548 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
HDAC1-201ENST00000373548 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
HDAC1-201ENST00000373548 NRAPQ86VF7 1730 aa24■■□□□ 1.43
HDAC1-201ENST00000373548 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
HDAC1-201ENST00000373548 ASAP1Q9ULH1 1129 aa24■■□□□ 1.43
HDAC1-201ENST00000373548 LRP6O75581 1613 aa24■■□□□ 1.43
HDAC1-201ENST00000373548 CHMLP26374 656 aa23.99■■□□□ 1.43
HDAC1-201ENST00000373548 SPRYD3Q8NCJ5 442 aa23.99■■□□□ 1.43
HDAC1-201ENST00000373548 JARID2Q92833 1246 aaPredicted RBP23.99■■□□□ 1.43
HDAC1-201ENST00000373548 COL15A1P39059 1388 aa23.99■■□□□ 1.43
HDAC1-201ENST00000373548 UBE3BQ7Z3V4 1068 aa23.99■■□□□ 1.43
HDAC1-201ENST00000373548 CLASRPQ8N2M8 674 aaKnown RBP23.99■■□□□ 1.43
HDAC1-201ENST00000373548 ESYT1Q9BSJ8 1104 aa23.99■■□□□ 1.43
HDAC1-201ENST00000373548 CD2BP2O95400 341 aaKnown RBP23.98■■□□□ 1.43
HDAC1-201ENST00000373548 ADAMTS2O95450 1211 aa23.98■■□□□ 1.43
HDAC1-201ENST00000373548 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
HDAC1-201ENST00000373548 A0A087WZG4 1122 aa23.97■■□□□ 1.43
HDAC1-201ENST00000373548 SASH1O94885 1247 aa23.97■■□□□ 1.43
HDAC1-201ENST00000373548 CASP7P55210 303 aa23.97■■□□□ 1.43
HDAC1-201ENST00000373548 TTC41PQ6P2S7 1318 aa23.97■■□□□ 1.43
HDAC1-201ENST00000373548 TJP1Q07157 1748 aa23.97■■□□□ 1.43
HDAC1-201ENST00000373548 G3BP1Q13283 466 aaKnown RBP eCLIP23.96■■□□□ 1.431e-8■□□□□ 10.1
HDAC1-201ENST00000373548 KAT6BQ8WYB5 2073 aa23.96■■□□□ 1.43
HDAC1-201ENST00000373548 EXOC5O00471 708 aa23.96■■□□□ 1.43
HDAC1-201ENST00000373548 BCL9O00512 1426 aa23.95■■□□□ 1.43
HDAC1-201ENST00000373548 RABL6Q3YEC7 729 aaPredicted RBP23.95■■□□□ 1.42
HDAC1-201ENST00000373548 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
HDAC1-201ENST00000373548 RABEP1Q15276 862 aa23.95■■□□□ 1.42
HDAC1-201ENST00000373548 DNAJC10Q8IXB1 793 aa23.95■■□□□ 1.42
HDAC1-201ENST00000373548 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.42
HDAC1-201ENST00000373548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.95■■□□□ 1.42
HDAC1-201ENST00000373548 MAP4K4O95819 1239 aaPredicted RBP23.94■■□□□ 1.42
HDAC1-201ENST00000373548 TEX13AQ9BXU3 409 aaPredicted RBP23.93■■□□□ 1.42
HDAC1-201ENST00000373548 SIL1Q9H173 461 aa23.93■■□□□ 1.42
HDAC1-201ENST00000373548 ZBTB3Q9H5J0 574 aa23.93■■□□□ 1.42
HDAC1-201ENST00000373548 H7C1W4 665 aa23.93■■□□□ 1.42
HDAC1-201ENST00000373548 FRAT2O75474 233 aaPredicted RBP23.93■■□□□ 1.42
HDAC1-201ENST00000373548 GLRX3O76003 335 aaKnown RBP23.93■■□□□ 1.42
HDAC1-201ENST00000373548 RFX5P48382 616 aaPredicted RBP23.93■■□□□ 1.42
HDAC1-201ENST00000373548 AACSQ86V21 672 aa23.93■■□□□ 1.42
HDAC1-201ENST00000373548 IFIT2P09913 472 aaKnown RBP23.92■■□□□ 1.42
HDAC1-201ENST00000373548 ECHDC1Q9NTX5 307 aa23.92■■□□□ 1.42
HDAC1-201ENST00000373548 SPATA31A1Q5TZJ5 1347 aa23.92■■□□□ 1.42
HDAC1-201ENST00000373548 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.92■■□□□ 1.42
HDAC1-201ENST00000373548 COPRSQ9NQ92 184 aa23.92■■□□□ 1.42
HDAC1-201ENST00000373548 CWC25Q9NXE8 425 aaPredicted RBP23.92■■□□□ 1.42
HDAC1-201ENST00000373548 DOT1LQ8TEK3 1739 aa23.91■■□□□ 1.42
HDAC1-201ENST00000373548 CNTROBQ8N137 903 aa23.91■■□□□ 1.42
HDAC1-201ENST00000373548 EAF2Q96CJ1 260 aaPredicted RBP23.91■■□□□ 1.42
HDAC1-201ENST00000373548 K7ELQ4 463 aaPredicted RBP23.9■■□□□ 1.42
HDAC1-201ENST00000373548 PIP4K2BP78356 416 aa23.9■■□□□ 1.42
HDAC1-201ENST00000373548 GPATCH3Q96I76 525 aa23.9■■□□□ 1.42
HDAC1-201ENST00000373548 CDCA7Q9BWT1 371 aaPredicted RBP23.9■■□□□ 1.42
HDAC1-201ENST00000373548 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.42
HDAC1-201ENST00000373548 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.42
HDAC1-201ENST00000373548 TOM1O60784 492 aa23.89■■□□□ 1.42
HDAC1-201ENST00000373548 PTPN12Q05209 780 aaKnown RBP23.89■■□□□ 1.42
HDAC1-201ENST00000373548 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.42
HDAC1-201ENST00000373548 FOXO4P98177 505 aa23.89■■□□□ 1.41
HDAC1-201ENST00000373548 CCDC191Q8NCU4 936 aa23.89■■□□□ 1.41
HDAC1-201ENST00000373548 IL25Q9H293 177 aa23.89■■□□□ 1.41
HDAC1-201ENST00000373548 CHMP5Q9NZZ3 219 aa23.89■■□□□ 1.41
HDAC1-201ENST00000373548 THRAP3Q9Y2W1 955 aaKnown RBP23.89■■□□□ 1.41
HDAC1-201ENST00000373548 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
HDAC1-201ENST00000373548 STARD3NLO95772 234 aa23.88■■□□□ 1.41
HDAC1-201ENST00000373548 DDIT3P35638 169 aa23.88■■□□□ 1.41
HDAC1-201ENST00000373548 SLC4A9Q96Q91 983 aa23.88■■□□□ 1.41
HDAC1-201ENST00000373548 ANO2Q9NQ90 1003 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms