RNA–Protein interactions for RNA: ENST00000372833.5

CHCHD1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD1, Length 835 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-201ENST00000372833 HTRA3P83110 453 aa23.51■■□□□ 1.35
CHCHD1-201ENST00000372833 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
CHCHD1-201ENST00000372833 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
CHCHD1-201ENST00000372833 WDR90Q96KV7 1748 aa23.5■■□□□ 1.35
CHCHD1-201ENST00000372833 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
CHCHD1-201ENST00000372833 STYK1Q6J9G0 422 aa23.49■■□□□ 1.35
CHCHD1-201ENST00000372833 CLEC4GQ6UXB4 293 aa23.49■■□□□ 1.35
CHCHD1-201ENST00000372833 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
CHCHD1-201ENST00000372833 COL11A2P13942 1736 aaPredicted RBP23.48■■□□□ 1.35
CHCHD1-201ENST00000372833 PRPF40BQ6NWY9 871 aaKnown RBP23.48■■□□□ 1.35
CHCHD1-201ENST00000372833 DNAJC5GQ8N7S2 189 aa23.48■■□□□ 1.35
CHCHD1-201ENST00000372833 MASTLQ96GX5 879 aa23.48■■□□□ 1.35
CHCHD1-201ENST00000372833 TAOK3Q9H2K8 898 aa23.48■■□□□ 1.35
CHCHD1-201ENST00000372833 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
CHCHD1-201ENST00000372833 SRGNP10124 158 aa23.47■■□□□ 1.35
CHCHD1-201ENST00000372833 SOGA3Q5TF21 947 aa23.47■■□□□ 1.35
CHCHD1-201ENST00000372833 MIS18AQ9NYP9 233 aa23.47■■□□□ 1.35
CHCHD1-201ENST00000372833 NIP7Q9Y221 180 aaKnown RBP eCLIP23.47■■□□□ 1.35
CHCHD1-201ENST00000372833 CCDC88AQ3V6T2 1871 aa23.46■■□□□ 1.35
CHCHD1-201ENST00000372833 GTF2E1P29083 439 aaPredicted RBP23.45■■□□□ 1.34
CHCHD1-201ENST00000372833 TPTE2Q6XPS3 522 aa23.45■■□□□ 1.34
CHCHD1-201ENST00000372833 KLRG1Q96E93 195 aa23.45■■□□□ 1.34
CHCHD1-201ENST00000372833 NBPF26B4DH59 902 aa23.44■■□□□ 1.34
CHCHD1-201ENST00000372833 NBPF10Q6P3W6 841 aaKnown RBP23.44■■□□□ 1.34
CHCHD1-201ENST00000372833 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
CHCHD1-201ENST00000372833 NBPF15Q8N660 670 aa23.44■■□□□ 1.34
CHCHD1-201ENST00000372833 PNISRQ8TF01 805 aaKnown RBP23.44■■□□□ 1.34
CHCHD1-201ENST00000372833 MAPK8IP3Q9UPT6 1336 aa23.43■■□□□ 1.34
CHCHD1-201ENST00000372833 CACNA1SQ13698 1873 aa23.43■■□□□ 1.34
CHCHD1-201ENST00000372833 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
CHCHD1-201ENST00000372833 NPR1P16066 1061 aa23.42■■□□□ 1.34
CHCHD1-201ENST00000372833 PNNQ9H307 717 aaKnown RBP23.41■■□□□ 1.34
CHCHD1-201ENST00000372833 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
CHCHD1-201ENST00000372833 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
CHCHD1-201ENST00000372833 FER1L6Q2WGJ9 1857 aa23.4■■□□□ 1.34
CHCHD1-201ENST00000372833 NFE2L2Q16236 605 aa23.39■■□□□ 1.33
CHCHD1-201ENST00000372833 RRP7AQ9Y3A4 280 aaKnown RBP23.39■■□□□ 1.33
CHCHD1-201ENST00000372833 RGL2O15211 777 aa23.38■■□□□ 1.33
CHCHD1-201ENST00000372833 HLFQ16534 295 aa23.38■■□□□ 1.33
CHCHD1-201ENST00000372833 KIF6Q6ZMV9 814 aa23.38■■□□□ 1.33
CHCHD1-201ENST00000372833 THUMPD2Q9BTF0 503 aaKnown RBP23.38■■□□□ 1.33
CHCHD1-201ENST00000372833 DDNO94850 711 aaPredicted RBP23.37■■□□□ 1.33
CHCHD1-201ENST00000372833 MYL6BP14649 208 aa23.37■■□□□ 1.33
CHCHD1-201ENST00000372833 LAMB4A4D0S4 1761 aa23.37■■□□□ 1.33
CHCHD1-201ENST00000372833 NYXQ9GZU5 481 aa23.36■■□□□ 1.33
CHCHD1-201ENST00000372833 DICER1Q9UPY3 1922 aaKnown RBP23.35■■□□□ 1.33
CHCHD1-201ENST00000372833 ARFGEF2Q9Y6D5 1785 aa23.35■■□□□ 1.33
CHCHD1-201ENST00000372833 POTECB2RU33 542 aa23.35■■□□□ 1.33
CHCHD1-201ENST00000372833 PLEKHF1Q96S99 279 aa23.35■■□□□ 1.33
CHCHD1-201ENST00000372833 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
CHCHD1-201ENST00000372833 ALDH1B1P30837 517 aa23.34■■□□□ 1.33
CHCHD1-201ENST00000372833 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
CHCHD1-201ENST00000372833 JMYQ8N9B5 988 aa23.34■■□□□ 1.33
CHCHD1-201ENST00000372833 FKBP4Q02790 459 aaKnown RBP eCLIP23.33■■□□□ 1.33
CHCHD1-201ENST00000372833 RTKN2Q8IZC4 609 aa23.33■■□□□ 1.33
CHCHD1-201ENST00000372833 C7orf43Q8WVR3 580 aa23.33■■□□□ 1.33
CHCHD1-201ENST00000372833 ZBTB3Q9H5J0 574 aa23.33■■□□□ 1.33
CHCHD1-201ENST00000372833 ZNF277Q9NRM2 450 aaPredicted RBP23.33■■□□□ 1.33
CHCHD1-201ENST00000372833 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.32
CHCHD1-201ENST00000372833 KLRG2A4D1S0 409 aaPredicted RBP23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 IQCA1LA6NCM1 817 aa23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 ERVV-1B6SEH8 477 aa23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 CHADLQ6NUI6 762 aa23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 NUTM1Q86Y26 1132 aa23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
CHCHD1-201ENST00000372833 GPTP24298 496 aa23.31■■□□□ 1.32
CHCHD1-201ENST00000372833 OLFM4Q6UX06 510 aa23.31■■□□□ 1.32
CHCHD1-201ENST00000372833 RPGRQ92834 1020 aaKnown RBP23.31■■□□□ 1.32
CHCHD1-201ENST00000372833 TSPYL4Q9UJ04 414 aa23.31■■□□□ 1.32
CHCHD1-201ENST00000372833 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
CHCHD1-201ENST00000372833 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
CHCHD1-201ENST00000372833 RIPK4P57078 832 aa23.28■■□□□ 1.32
CHCHD1-201ENST00000372833 POTEIP0CG38 1075 aa23.27■■□□□ 1.32
CHCHD1-201ENST00000372833 POTEJP0CG39 1038 aa23.27■■□□□ 1.32
CHCHD1-201ENST00000372833 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
CHCHD1-201ENST00000372833 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
CHCHD1-201ENST00000372833 SYNE4Q8N205 404 aa23.27■■□□□ 1.32
CHCHD1-201ENST00000372833 IARSP41252 1262 aaKnown RBP23.26■■□□□ 1.31
CHCHD1-201ENST00000372833 RALBP1Q15311 655 aa23.26■■□□□ 1.31
CHCHD1-201ENST00000372833 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
CHCHD1-201ENST00000372833 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
CHCHD1-201ENST00000372833 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
CHCHD1-201ENST00000372833 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
CHCHD1-201ENST00000372833 JDP2Q8WYK2 163 aa23.25■■□□□ 1.31
CHCHD1-201ENST00000372833 L3MBTL3Q96JM7 780 aaPredicted RBP23.25■■□□□ 1.31
CHCHD1-201ENST00000372833 CLEC11AQ9Y240 323 aa23.25■■□□□ 1.31
CHCHD1-201ENST00000372833 NUP98P52948 1817 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 GIGYF2Q6Y7W6 1299 aaKnown RBP23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 PPP1R42Q7Z4L9 355 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 TAF1DQ9H5J8 278 aaPredicted RBP23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 UBN2Q6ZU65 1347 aa23.24■■□□□ 1.31
CHCHD1-201ENST00000372833 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
CHCHD1-201ENST00000372833 COL13A1Q5TAT6 717 aaPredicted RBP23.23■■□□□ 1.31
CHCHD1-201ENST00000372833 CC2D2BQ6DHV5 1058 aa23.23■■□□□ 1.31
CHCHD1-201ENST00000372833 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
CHCHD1-201ENST00000372833 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
CHCHD1-201ENST00000372833 CREBZFQ9NS37 354 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms