RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 NALCNQ8IZF0 1738 aa8.78□□□□□ -1
USP1-202ENST00000371146 TBC1D9BQ66K14 1250 aa8.77□□□□□ -1
USP1-202ENST00000371146 AMIGO3Q86WK7 504 aa8.77□□□□□ -1
USP1-202ENST00000371146 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
USP1-202ENST00000371146 CCDC57Q2TAC2 916 aa8.77□□□□□ -1.01
USP1-202ENST00000371146 SLC4A9Q96Q91 983 aa8.77□□□□□ -1.01
USP1-202ENST00000371146 SRCIN1Q9C0H9 1055 aa8.77□□□□□ -1.01
USP1-202ENST00000371146 NLGN2Q8NFZ4 835 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
USP1-202ENST00000371146 NAP1L2Q9ULW6 460 aaPredicted RBP8.76□□□□□ -1.01
USP1-202ENST00000371146 NFIXQ14938 502 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 CPDO75976 1380 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
USP1-202ENST00000371146 CCDC27Q2M243 656 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 CAMKK2Q96RR4 588 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 ABCF2Q9UG63 623 aa8.76□□□□□ -1.01
USP1-202ENST00000371146 TAF5LO75529 589 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 RPS6KA4O75676 772 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 DOK7Q18PE1 504 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 PPP1R42Q7Z4L9 355 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 CCDC125Q86Z20 511 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 ZNF142P52746 1687 aaPredicted RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 DLC1Q96QB1 1528 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 DNAAF4Q8WXU2 420 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 UTP14AQ9BVJ6 771 aaKnown RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 IL1RAPL2Q9NP60 686 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 CD163L1Q9NR16 1453 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 SURF6O75683 361 aaKnown RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 CYP19A1P11511 503 aaPredicted RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 ERFEQ4G0M1 354 aa8.75□□□□□ -1.01
USP1-202ENST00000371146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■■■■□ 26
USP1-202ENST00000371146 CDK12Q9NYV4 1490 aaPredicted RBP8.75□□□□□ -1.01
USP1-202ENST00000371146 DPEP1P16444 411 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 TTLL12Q14166 644 aaPredicted RBP8.74□□□□□ -1.01
USP1-202ENST00000371146 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 LMBR1LQ6UX01 489 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 LDHAL6AQ6ZMR3 332 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 LARGE2Q8N3Y3 721 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 MTMR7Q9Y216 660 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 BLMP54132 1417 aaPredicted RBP8.74□□□□□ -1.01
USP1-202ENST00000371146 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
USP1-202ENST00000371146 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
USP1-202ENST00000371146 JDP2Q8WYK2 163 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 MED1Q15648 1581 aaPredicted RBP8.74□□□□□ -1.01
USP1-202ENST00000371146 PARD3Q8TEW0 1356 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 YY1P25490 414 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 SYT17Q9BSW7 474 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 SNRKQ9NRH2 765 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 RNF181Q9P0P0 153 aa8.74□□□□□ -1.01
USP1-202ENST00000371146 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
USP1-202ENST00000371146 SEC31BQ9NQW1 1179 aa8.73□□□□□ -1.01
USP1-202ENST00000371146 HYPKQ9NX55 129 aa8.73□□□□□ -1.01
USP1-202ENST00000371146 CWC25Q9NXE8 425 aaPredicted RBP8.73□□□□□ -1.01
USP1-202ENST00000371146 IGHMBP2P38935 993 aaKnown RBP8.73□□□□□ -1.01
USP1-202ENST00000371146 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
USP1-202ENST00000371146 MTFR1LQ9H019 292 aa8.73□□□□□ -1.01
USP1-202ENST00000371146 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
USP1-202ENST00000371146 RAD17O75943 681 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 TPRNQ4KMQ1 711 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 DDX21Q9NR30 783 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP1-202ENST00000371146 EXOC6BQ9Y2D4 811 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 DZIP1LQ8IYY4 767 aaKnown RBP8.72□□□□□ -1.01
USP1-202ENST00000371146 FLAD1Q8NFF5 587 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 ZNF277Q9NRM2 450 aaPredicted RBP8.72□□□□□ -1.01
USP1-202ENST00000371146 PLSCR1O15162 318 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 MAP4K4O95819 1239 aaPredicted RBP8.72□□□□□ -1.01
USP1-202ENST00000371146 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP1-202ENST00000371146 IFIT5Q13325 482 aaKnown RBP8.72□□□□□ -1.01
USP1-202ENST00000371146 SUSD4Q5VX71 490 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 PLEKHF1Q96S99 279 aa8.72□□□□□ -1.01
USP1-202ENST00000371146 ARHGEF28Q8N1W1 1705 aaKnown RBP8.72□□□□□ -1.01
USP1-202ENST00000371146 CHL1O00533 1208 aa8.71□□□□□ -1.01
USP1-202ENST00000371146 CHRM1P11229 460 aaPredicted RBP8.71□□□□□ -1.01
USP1-202ENST00000371146 C20orf194Q5TEA3 1177 aa8.71□□□□□ -1.01
USP1-202ENST00000371146 ZC3H12CQ9C0D7 883 aaKnown RBP8.71□□□□□ -1.01
USP1-202ENST00000371146 DBNDD1Q9H9R9 158 aa8.71□□□□□ -1.01
USP1-202ENST00000371146 TOMM22Q9NS69 142 aa8.71□□□□□ -1.01
USP1-202ENST00000371146 DALRD3Q5D0E6 543 aaKnown RBP8.71□□□□□ -1.02
USP1-202ENST00000371146 LRRFIP2Q9Y608 721 aaKnown RBP8.71□□□□□ -1.02
USP1-202ENST00000371146 SH3TC1Q8TE82 1336 aa8.71□□□□□ -1.02
USP1-202ENST00000371146 PPIP5K2O43314 1243 aa8.71□□□□□ -1.02
USP1-202ENST00000371146 GYS1P13807 737 aa8.71□□□□□ -1.02
USP1-202ENST00000371146 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
USP1-202ENST00000371146 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
USP1-202ENST00000371146 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 RRP9O43818 475 aaKnown RBP8.7□□□□□ -1.02
USP1-202ENST00000371146 VAMP4O75379 141 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 FKBP4Q02790 459 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP1-202ENST00000371146 ZSCAN29Q8IWY8 852 aaPredicted RBP8.7□□□□□ -1.02
USP1-202ENST00000371146 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms