RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CHADLQ6NUI6 762 aa20.2■□□□□ 0.82
RPF1-202ENST00000370656 FMNL2Q96PY5 1086 aa20.2■□□□□ 0.82
RPF1-202ENST00000370656 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
RPF1-202ENST00000370656 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
RPF1-202ENST00000370656 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
RPF1-202ENST00000370656 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
RPF1-202ENST00000370656 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
RPF1-202ENST00000370656 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
RPF1-202ENST00000370656 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
RPF1-202ENST00000370656 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
RPF1-202ENST00000370656 CCDC24Q8N4L8 307 aa20.18■□□□□ 0.82
RPF1-202ENST00000370656 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
RPF1-202ENST00000370656 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
RPF1-202ENST00000370656 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
RPF1-202ENST00000370656 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
RPF1-202ENST00000370656 SCN4AP35499 1836 aa20.16■□□□□ 0.82
RPF1-202ENST00000370656 SRGNP10124 158 aa20.16■□□□□ 0.82
RPF1-202ENST00000370656 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
RPF1-202ENST00000370656 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
RPF1-202ENST00000370656 DDNO94850 711 aaPredicted RBP20.15■□□□□ 0.82
RPF1-202ENST00000370656 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
RPF1-202ENST00000370656 PER1O15534 1290 aaPredicted RBP20.14■□□□□ 0.81
RPF1-202ENST00000370656 A1BGP04217 495 aa20.14■□□□□ 0.81
RPF1-202ENST00000370656 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
RPF1-202ENST00000370656 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
RPF1-202ENST00000370656 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
RPF1-202ENST00000370656 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
RPF1-202ENST00000370656 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
RPF1-202ENST00000370656 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
RPF1-202ENST00000370656 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
RPF1-202ENST00000370656 NBPF5PQ86XG9 351 aaPredicted RBP20.12■□□□□ 0.81
RPF1-202ENST00000370656 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
RPF1-202ENST00000370656 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
RPF1-202ENST00000370656 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
RPF1-202ENST00000370656 FOXN1O15353 648 aa20.1■□□□□ 0.81
RPF1-202ENST00000370656 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
RPF1-202ENST00000370656 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
RPF1-202ENST00000370656 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
RPF1-202ENST00000370656 NPR1P16066 1061 aa20.09■□□□□ 0.81
RPF1-202ENST00000370656 MIER1Q8N108 512 aa20.09■□□□□ 0.81
RPF1-202ENST00000370656 CNTNAP1P78357 1384 aa20.08■□□□□ 0.81
RPF1-202ENST00000370656 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
RPF1-202ENST00000370656 TPTE2Q6XPS3 522 aa20.08■□□□□ 0.81
RPF1-202ENST00000370656 AIDAQ96BJ3 306 aa20.08■□□□□ 0.81
RPF1-202ENST00000370656 CFAP53Q96M91 514 aa20.08■□□□□ 0.81
RPF1-202ENST00000370656 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
RPF1-202ENST00000370656 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
RPF1-202ENST00000370656 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
RPF1-202ENST00000370656 RTKN2Q8IZC4 609 aa20.07■□□□□ 0.8
RPF1-202ENST00000370656 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
RPF1-202ENST00000370656 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 RGL2O15211 777 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 KCNQ3O43525 872 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 C7orf43Q8WVR3 580 aa20.06■□□□□ 0.8
RPF1-202ENST00000370656 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
RPF1-202ENST00000370656 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
RPF1-202ENST00000370656 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
RPF1-202ENST00000370656 PRDM10Q9NQV6 1147 aa20.05■□□□□ 0.8
RPF1-202ENST00000370656 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
RPF1-202ENST00000370656 CLEC11AQ9Y240 323 aa20.05■□□□□ 0.8
RPF1-202ENST00000370656 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
RPF1-202ENST00000370656 KLRG2A4D1S0 409 aaPredicted RBP20.04■□□□□ 0.8
RPF1-202ENST00000370656 ALDH1B1P30837 517 aa20.04■□□□□ 0.8
RPF1-202ENST00000370656 PIP4K2AP48426 406 aaPredicted RBP20.04■□□□□ 0.8
RPF1-202ENST00000370656 ZNF277Q9NRM2 450 aaPredicted RBP20.04■□□□□ 0.8
RPF1-202ENST00000370656 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
RPF1-202ENST00000370656 GTF2E1P29083 439 aaPredicted RBP20.03■□□□□ 0.8
RPF1-202ENST00000370656 CTCFP49711 727 aaPredicted RBP20.03■□□□□ 0.8
RPF1-202ENST00000370656 PNMA8AQ86V59 439 aaPredicted RBP20.03■□□□□ 0.8
RPF1-202ENST00000370656 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
RPF1-202ENST00000370656 ITGBL1O95965 494 aaPredicted RBP20.02■□□□□ 0.8
RPF1-202ENST00000370656 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.79
RPF1-202ENST00000370656 SLC34A2O95436 690 aa20.01■□□□□ 0.79
RPF1-202ENST00000370656 EPHX2P34913 555 aa20.01■□□□□ 0.79
RPF1-202ENST00000370656 VEGFBP49765 207 aa20.01■□□□□ 0.79
RPF1-202ENST00000370656 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
RPF1-202ENST00000370656 FAM177BA6PVY3 158 aa20■□□□□ 0.79
RPF1-202ENST00000370656 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
RPF1-202ENST00000370656 JDP2Q8WYK2 163 aa20■□□□□ 0.79
RPF1-202ENST00000370656 ADAMTSL1Q8N6G6 1762 aa19.99■□□□□ 0.79
RPF1-202ENST00000370656 MCM10Q7L590 875 aa19.99■□□□□ 0.79
RPF1-202ENST00000370656 GPC2Q8N158 579 aa19.99■□□□□ 0.79
RPF1-202ENST00000370656 SYNE4Q8N205 404 aa19.99■□□□□ 0.79
RPF1-202ENST00000370656 FZD9O00144 591 aa19.98■□□□□ 0.79
RPF1-202ENST00000370656 U2AF1L5P0DN76 240 aaPredicted RBP19.98■□□□□ 0.79
RPF1-202ENST00000370656 LBX1P52954 281 aa19.98■□□□□ 0.79
RPF1-202ENST00000370656 U2AF1Q01081 240 aaKnown RBP eCLIP19.98■□□□□ 0.79
RPF1-202ENST00000370656 NYXQ9GZU5 481 aa19.98■□□□□ 0.79
RPF1-202ENST00000370656 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
RPF1-202ENST00000370656 LAMB4A4D0S4 1761 aa19.98■□□□□ 0.79
RPF1-202ENST00000370656 NBPF26B4DH59 902 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
RPF1-202ENST00000370656 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 NBPF10Q6P3W6 841 aaKnown RBP19.97■□□□□ 0.79
RPF1-202ENST00000370656 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 NBPF15Q8N660 670 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms