RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SRP68Q9UHB9 627 aaKnown RBP19.9■□□□□ 0.78
PRPF38B-202ENST00000370022 SCN7AQ01118 1682 aa19.89■□□□□ 0.77
PRPF38B-202ENST00000370022 AIMP1Q12904 312 aaKnown RBP19.89■□□□□ 0.77
PRPF38B-202ENST00000370022 TTLL7Q6ZT98 887 aa19.89■□□□□ 0.77
PRPF38B-202ENST00000370022 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
PRPF38B-202ENST00000370022 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
PRPF38B-202ENST00000370022 CACNA1FO60840 1977 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 ZBTB7AO95365 584 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 PLBD2Q8NHP8 589 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 SSH1Q8WYL5 1049 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 RARSP54136 660 aaKnown RBP19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 FLIIQ13045 1269 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 BCL2L12Q9HB09 334 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
PRPF38B-202ENST00000370022 BRPF1P55201 1214 aaPredicted RBP19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 FKBP8Q14318 412 aa19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 GIGYF2Q6Y7W6 1299 aaKnown RBP19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 MRPL50Q8N5N7 158 aaKnown RBP19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 ZBTB3Q9H5J0 574 aa19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 SPON1Q9HCB6 807 aa19.86■□□□□ 0.77
PRPF38B-202ENST00000370022 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
PRPF38B-202ENST00000370022 POLD1P28340 1107 aa19.84■□□□□ 0.77
PRPF38B-202ENST00000370022 MSL1Q68DK7 614 aa19.84■□□□□ 0.77
PRPF38B-202ENST00000370022 G2E3Q7L622 706 aa19.84■□□□□ 0.77
PRPF38B-202ENST00000370022 COL24A1Q17RW2 1714 aa19.84■□□□□ 0.77
PRPF38B-202ENST00000370022 HLFQ16534 295 aa19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 ATF5Q9Y2D1 282 aaPredicted RBP19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 PTPRCP08575 1304 aa19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 ATP10DQ9P241 1426 aa19.83■□□□□ 0.77
PRPF38B-202ENST00000370022 TM4SF1P30408 202 aa19.83■□□□□ 0.76
PRPF38B-202ENST00000370022 FKBP5Q13451 457 aaPredicted RBP19.83■□□□□ 0.76
PRPF38B-202ENST00000370022 BCL2L13Q9BXK5 485 aa19.83■□□□□ 0.76
PRPF38B-202ENST00000370022 TBC1D9BQ66K14 1250 aa19.82■□□□□ 0.76
PRPF38B-202ENST00000370022 SGIP1Q9BQI5 828 aa19.82■□□□□ 0.76
PRPF38B-202ENST00000370022 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
PRPF38B-202ENST00000370022 MMP10P09238 476 aa19.81■□□□□ 0.76
PRPF38B-202ENST00000370022 NFIXQ14938 502 aa19.81■□□□□ 0.76
PRPF38B-202ENST00000370022 SETDB2Q96T68 719 aa19.81■□□□□ 0.76
PRPF38B-202ENST00000370022 CARMIL3Q8ND23 1372 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 PI4KAP2A4QPH2 592 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 PTGER2P43116 358 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 TCIRG1Q13488 830 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 PI4KAP1Q8N8J0 262 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 NIP7Q9Y221 180 aaKnown RBP eCLIP19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
PRPF38B-202ENST00000370022 ADCY9O60503 1353 aa19.79■□□□□ 0.76
PRPF38B-202ENST00000370022 ZNF34Q8IZ26 560 aa19.79■□□□□ 0.76
PRPF38B-202ENST00000370022 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
PRPF38B-202ENST00000370022 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 BICDL1Q6ZP65 573 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 METTL22Q9BUU2 404 aaPredicted RBP19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 NUP98P52948 1817 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 POLRMTO00411 1230 aaKnown RBP19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 NEXNQ0ZGT2 675 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 DNAAF4Q8WXU2 420 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 RCAN3Q9UKA8 241 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 ARFGEF2Q9Y6D5 1785 aa19.78■□□□□ 0.76
PRPF38B-202ENST00000370022 IPO8O15397 1037 aaKnown RBP19.77■□□□□ 0.76
PRPF38B-202ENST00000370022 BCAR3O75815 825 aa19.77■□□□□ 0.76
PRPF38B-202ENST00000370022 DDR1Q08345 913 aa19.77■□□□□ 0.76
PRPF38B-202ENST00000370022 TRIM28Q13263 835 aaKnown RBP19.77■□□□□ 0.76
PRPF38B-202ENST00000370022 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
PRPF38B-202ENST00000370022 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
PRPF38B-202ENST00000370022 IBTKQ9P2D0 1353 aaPredicted RBP19.76■□□□□ 0.75
PRPF38B-202ENST00000370022 LRP5O75197 1615 aa19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 SERPINB2P05120 415 aa19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 MYD88Q99836 296 aa19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 API5Q9BZZ5 524 aaKnown RBP19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 ANKRD36CQ5JPF3 1778 aa19.75■□□□□ 0.75
PRPF38B-202ENST00000370022 GPTP24298 496 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 TPTE2Q6XPS3 522 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 RNF123Q5XPI4 1314 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 UBN2Q6ZU65 1347 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 NLRP10Q86W26 655 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 NBPF5PQ86XG9 351 aaPredicted RBP19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 CCDC191Q8NCU4 936 aa19.74■□□□□ 0.75
PRPF38B-202ENST00000370022 F6X3S4 739 aa19.73■□□□□ 0.75
PRPF38B-202ENST00000370022 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
PRPF38B-202ENST00000370022 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
PRPF38B-202ENST00000370022 NRXN2Q9P2S2 1712 aa19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 ATP5J2-PTCD1G3V325 749 aa19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 ZKSCAN2Q63HK3 967 aa19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 CNBD1Q8NA66 436 aa19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 PPP1R1BQ9UD71 204 aaPredicted RBP19.72■□□□□ 0.75
PRPF38B-202ENST00000370022 NPHP1O15259 732 aa19.71■□□□□ 0.75
PRPF38B-202ENST00000370022 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
PRPF38B-202ENST00000370022 ATF7IPQ6VMQ6 1270 aa19.71■□□□□ 0.75
PRPF38B-202ENST00000370022 UTP14AQ9BVJ6 771 aaKnown RBP19.71■□□□□ 0.75
PRPF38B-202ENST00000370022 CWC25Q9NXE8 425 aaPredicted RBP19.71■□□□□ 0.75
PRPF38B-202ENST00000370022 IGKV5-2P06315 115 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 ST5P78524 1137 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms