RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
CHTOP-203ENST00000368690 C17orf53Q8N3J3 647 aaPredicted RBP20.85■□□□□ 0.93
CHTOP-203ENST00000368690 PODXL2Q9NZ53 605 aa20.85■□□□□ 0.93
CHTOP-203ENST00000368690 CACNA1FO60840 1977 aa20.84■□□□□ 0.93
CHTOP-203ENST00000368690 KCNF1Q9H3M0 494 aa20.84■□□□□ 0.93
CHTOP-203ENST00000368690 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
CHTOP-203ENST00000368690 SYT1P21579 422 aa20.83■□□□□ 0.93
CHTOP-203ENST00000368690 TSHZ3Q63HK5 1081 aa20.83■□□□□ 0.93
CHTOP-203ENST00000368690 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
CHTOP-203ENST00000368690 BRINP3Q76B58 766 aa20.83■□□□□ 0.93
CHTOP-203ENST00000368690 RIOK3O14730 519 aaKnown RBP20.83■□□□□ 0.92
CHTOP-203ENST00000368690 PDIA4P13667 645 aaKnown RBP20.83■□□□□ 0.92
CHTOP-203ENST00000368690 FOXD4L6Q3SYB3 417 aaPredicted RBP20.83■□□□□ 0.92
CHTOP-203ENST00000368690 FOXD4L3Q6VB84 417 aaPredicted RBP20.83■□□□□ 0.92
CHTOP-203ENST00000368690 MCM10Q7L590 875 aa20.83■□□□□ 0.92
CHTOP-203ENST00000368690 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
CHTOP-203ENST00000368690 MPNDQ8N594 471 aa20.82■□□□□ 0.92
CHTOP-203ENST00000368690 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
CHTOP-203ENST00000368690 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
CHTOP-203ENST00000368690 PYCARDQ9ULZ3 195 aa20.82■□□□□ 0.92
CHTOP-203ENST00000368690 USP54Q70EL1 1684 aa20.82■□□□□ 0.92
CHTOP-203ENST00000368690 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
CHTOP-203ENST00000368690 PXDNLA1KZ92 1463 aa20.81■□□□□ 0.92
CHTOP-203ENST00000368690 CCDC192P0DO97 292 aa20.81■□□□□ 0.92
CHTOP-203ENST00000368690 G2E3Q7L622 706 aa20.81■□□□□ 0.92
CHTOP-203ENST00000368690 AEBP1Q8IUX7 1158 aa20.81■□□□□ 0.92
CHTOP-203ENST00000368690 HOXC9P31274 260 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 SMC3Q9UQE7 1217 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 SNX14Q9Y5W7 946 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 F6X3S4 739 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 SGSM2O43147 1006 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
CHTOP-203ENST00000368690 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
CHTOP-203ENST00000368690 PNMA6EA0A0J9YXQ4 647 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 AP5Z1O43299 807 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 GCP02774 474 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
CHTOP-203ENST00000368690 RAB11FIP3O75154 756 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 AK2P54819 239 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
CHTOP-203ENST00000368690 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
CHTOP-203ENST00000368690 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 LTN1O94822 1766 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 TAF3Q5VWG9 929 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 RUFY3Q7L099 469 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 FIBPO43427 364 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 FAM200AQ8TCP9 573 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 ZSCAN31Q96LW9 406 aaPredicted RBP20.78■□□□□ 0.92
CHTOP-203ENST00000368690 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 OGFRQ9NZT2 677 aa20.78■□□□□ 0.92
CHTOP-203ENST00000368690 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.92
CHTOP-203ENST00000368690 IL25Q9H293 177 aa20.77■□□□□ 0.92
CHTOP-203ENST00000368690 SH2B1Q9NRF2 756 aaPredicted RBP20.77■□□□□ 0.92
CHTOP-203ENST00000368690 NFAT5O94916 1531 aa20.76■□□□□ 0.91
CHTOP-203ENST00000368690 CCDC171Q6TFL3 1326 aa20.76■□□□□ 0.91
CHTOP-203ENST00000368690 TSPYL4Q9UJ04 414 aa20.76■□□□□ 0.91
CHTOP-203ENST00000368690 MTMR6Q9Y217 621 aa20.76■□□□□ 0.91
CHTOP-203ENST00000368690 SSH3Q8TE77 659 aa20.75■□□□□ 0.91
CHTOP-203ENST00000368690 ELP1O95163 1332 aa20.75■□□□□ 0.91
CHTOP-203ENST00000368690 FAM177BA6PVY3 158 aa20.75■□□□□ 0.91
CHTOP-203ENST00000368690 SMTNL1A8MU46 457 aa20.75■□□□□ 0.91
CHTOP-203ENST00000368690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.75■□□□□ 0.91
CHTOP-203ENST00000368690 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
CHTOP-203ENST00000368690 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
CHTOP-203ENST00000368690 ZC3H6P61129 1189 aaKnown RBP20.74■□□□□ 0.91
CHTOP-203ENST00000368690 FLIIQ13045 1269 aa20.74■□□□□ 0.91
CHTOP-203ENST00000368690 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
CHTOP-203ENST00000368690 ALS2Q96Q42 1657 aa20.74■□□□□ 0.91
CHTOP-203ENST00000368690 PXDNQ92626 1479 aa20.74■□□□□ 0.91
CHTOP-203ENST00000368690 PLCB2Q00722 1185 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 VPS53Q5VIR6 699 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 CCDC30Q5VVM6 783 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 PI4K2BQ8TCG2 481 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 HYPKQ9NX55 129 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 U2AF2P26368 475 aaKnown RBP eCLIP20.73■□□□□ 0.913e-7■■■■□ 22.1
CHTOP-203ENST00000368690 DNM1Q05193 864 aaKnown RBP20.73■□□□□ 0.91
CHTOP-203ENST00000368690 GABPB1Q06547 395 aaPredicted RBP20.73■□□□□ 0.91
CHTOP-203ENST00000368690 CNTROBQ8N137 903 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 PAXBP1Q9Y5B6 917 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 LRRC37A3O60309 1634 aa20.73■□□□□ 0.91
CHTOP-203ENST00000368690 NCBP1Q09161 790 aaKnown RBP20.72■□□□□ 0.91
CHTOP-203ENST00000368690 IP6K1Q92551 441 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 KCNB2Q92953 911 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 EYA1Q99502 592 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 SLIT3O75094 1523 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 GJB2P29033 226 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
CHTOP-203ENST00000368690 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
CHTOP-203ENST00000368690 SPATA31A3Q5VYP0 1347 aa20.71■□□□□ 0.91
CHTOP-203ENST00000368690 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
CHTOP-203ENST00000368690 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
CHTOP-203ENST00000368690 CGNQ9P2M7 1197 aaKnown RBP20.71■□□□□ 0.91
CHTOP-203ENST00000368690 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
CHTOP-203ENST00000368690 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
CHTOP-203ENST00000368690 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.91
CHTOP-203ENST00000368690 POLA2Q14181 598 aa20.7■□□□□ 0.91
CHTOP-203ENST00000368690 SPC24Q8NBT2 197 aa20.7■□□□□ 0.91
CHTOP-203ENST00000368690 PTGS1P23219 599 aa20.7■□□□□ 0.9
CHTOP-203ENST00000368690 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
CHTOP-203ENST00000368690 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms