RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ALDH1L1O75891 902 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 A2ML1A8K2U0 1454 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 IDH1O75874 414 aaKnown RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 ARHGEF10O15013 1369 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 LETM1O95202 739 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 GUCY1B3Q02153 619 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 HSPA2P54652 639 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 KRT32Q14532 448 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 LRRC2Q9BYS8 371 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 BICC1Q9H694 974 aaKnown RBP10.03□□□□□ -0.8
PTPRK-206ENST00000368215 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
PTPRK-206ENST00000368215 KINO60870 393 aaKnown RBP10.03□□□□□ -0.8
PTPRK-206ENST00000368215 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 ME1P48163 572 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 METTL24Q5JXM2 366 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 EIF4A1P60842 406 aaKnown RBP10.03□□□□□ -0.8
PTPRK-206ENST00000368215 ERICH2A1L162 156 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 SH2B1Q9NRF2 756 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-206ENST00000368215 ALKQ9UM73 1620 aa10.03□□□□□ -0.8
PTPRK-206ENST00000368215 USP6P35125 1406 aa10.02□□□□□ -0.8
PTPRK-206ENST00000368215 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.8
PTPRK-206ENST00000368215 ANAPC15P60006 121 aa10.02□□□□□ -0.8
PTPRK-206ENST00000368215 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.8
PTPRK-206ENST00000368215 STK38Q15208 465 aa10.02□□□□□ -0.8
PTPRK-206ENST00000368215 LMTK2Q8IWU2 1503 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 KIDINS220Q9ULH0 1771 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 AK2P54819 239 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-206ENST00000368215 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 NUP62CLQ9H1M0 184 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 MPHOSPH8Q99549 860 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 MTMR7Q9Y216 660 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
PTPRK-206ENST00000368215 STARD3NLO95772 234 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 IQGAP1P46940 1657 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
PTPRK-206ENST00000368215 CHAMP1Q96JM3 812 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTPRK-206ENST00000368215 CWC25Q9NXE8 425 aaPredicted RBP10.01□□□□□ -0.81
PTPRK-206ENST00000368215 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 HAND2P61296 217 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 DDX21Q9NR30 783 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTPRK-206ENST00000368215 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
PTPRK-206ENST00000368215 PKP1Q13835 747 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 ZNF790Q6PG37 636 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 RAB11FIP4Q86YS3 637 aa10.01□□□□□ -0.81
PTPRK-206ENST00000368215 USP48Q86UV5 1035 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 IGSF1Q8N6C5 1336 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 IFIT5Q13325 482 aaKnown RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.81
PTPRK-206ENST00000368215 CCDC183Q5T5S1 534 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 ANTXR1Q9H6X2 564 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 PALD1Q9ULE6 856 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 NDUFB9Q9Y6M9 179 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 NPHP3Q7Z494 1330 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 ZSCAN22P10073 491 aaPredicted RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 PNPLA6Q8IY17 1366 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 SUCLG2Q96I99 432 aa10□□□□□ -0.81
PTPRK-206ENST00000368215 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
PTPRK-206ENST00000368215 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 TRMT112Q9UI30 125 aaKnown RBP9.99□□□□□ -0.81
PTPRK-206ENST00000368215 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 CDK11BP21127 795 aaKnown RBP9.99□□□□□ -0.81
PTPRK-206ENST00000368215 TFCP2Q12800 502 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 MAP3K11Q16584 847 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 GIMAP6Q6P9H5 292 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 UNC5CLQ8IV45 518 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 BRF1Q92994 677 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 NEK1Q96PY6 1258 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 TTC41PQ6P2S7 1318 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 IMMTQ16891 758 aaKnown RBP9.99□□□□□ -0.81
PTPRK-206ENST00000368215 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 KIF24Q5T7B8 1368 aa9.99□□□□□ -0.81
PTPRK-206ENST00000368215 HCLS1P14317 486 aaPredicted RBP9.98□□□□□ -0.81
PTPRK-206ENST00000368215 DNM1Q05193 864 aaKnown RBP9.98□□□□□ -0.81
PTPRK-206ENST00000368215 PROSER3Q2NL68 480 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 BABAM1Q9NWV8 329 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 PRAMEF22A3QJZ6 481 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 TPD52L1Q16890 204 aaPredicted RBP9.98□□□□□ -0.81
PTPRK-206ENST00000368215 ZNF496Q96IT1 587 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms