RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 TEX11Q8IYF3 940 aa5.83□□□□□ -1.48
RC3H1-202ENST00000367694 TXLNBQ8N3L3 684 aa5.83□□□□□ -1.48
RC3H1-202ENST00000367694 RSPH9Q9H1X1 276 aaPredicted RBP5.83□□□□□ -1.48
RC3H1-202ENST00000367694 TMEM94Q12767 1356 aa5.83□□□□□ -1.48
RC3H1-202ENST00000367694 SNUPNO95149 360 aaKnown RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 RPL17P18621 184 aaKnown RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 CRYMQ14894 314 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 SDCCAG8Q86SQ7 713 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 ANKK1Q8NFD2 765 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 SLC35B4Q969S0 331 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 RBM17Q96I25 401 aaKnown RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 BAG1Q99933 345 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 DUSP9Q99956 384 aaKnown RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 FOXD4L1Q9NU39 408 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 LCMT1Q9UIC8 334 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 FBXO9Q9UK97 447 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 TMCO5BA8MYB1 307 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 SH3BP5O60239 455 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 RAB27AP51159 221 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 PKD2Q13563 968 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 POSTNQ15063 836 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 MYLK4Q86YV6 388 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 PIBF1Q8WXW3 757 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 ZSCAN16Q9H4T2 348 aaPredicted RBP5.82□□□□□ -1.48
RC3H1-202ENST00000367694 TONSLQ96HA7 1378 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 PBRM1Q86U86 1689 aa5.82□□□□□ -1.48
RC3H1-202ENST00000367694 TMEM110-MUSTN1A8MSY1 372 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TRIM66O15016 1216 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 PEX14O75381 377 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 NCBP1Q09161 790 aaKnown RBP5.81□□□□□ -1.48
RC3H1-202ENST00000367694 FAM161AQ3B820 660 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TCP11Q8WWU5 503 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 HMMRO75330 724 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 GCFC2P16383 781 aaKnown RBP5.81□□□□□ -1.48
RC3H1-202ENST00000367694 SKOR2Q2VWA4 1001 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-202ENST00000367694 HHATQ5VTY9 493 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 ANKRD13DQ6ZTN6 518 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TTC30AQ86WT1 665 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TMX1Q9H3N1 280 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 MCM8Q9UJA3 840 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TRIM37O94972 964 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 SMC2O95347 1197 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 SLC4A3P48751 1232 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 PSMD2Q13200 908 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 IRF5Q13568 498 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 CDCA2Q69YH5 1023 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-202ENST00000367694 C11orf96Q7Z7L8 435 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TTC30BQ8N4P2 665 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TAF4BQ92750 862 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 CRACR2AQ9BSW2 395 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 TOMM22Q9NS69 142 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 ATP8A1Q9Y2Q0 1164 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 U3KPZ7 1027 aaPredicted RBP5.81□□□□□ -1.48
RC3H1-202ENST00000367694 KIF27Q86VH2 1401 aa5.81□□□□□ -1.48
RC3H1-202ENST00000367694 PRXQ9BXM0 1461 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 U2SURPO15042 1029 aaKnown RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 CAPN15O75808 1086 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 CCDC159P0C7I6 412 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 SRPK2P78362 688 aaKnown RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 RASSF7Q02833 373 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 DDR1Q08345 913 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 ZNF662Q6ZS27 426 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 RPUSD2Q8IZ73 545 aaKnown RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 UNC45AQ9H3U1 944 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 NUDCQ9Y266 331 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 RTEL1-TNFRSF6BF6WH68 1400 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 FCHSD2O94868 740 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 USP11P51784 963 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 ZBED6P86452 979 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 E2F5Q15329 346 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 KRT77Q7Z794 578 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 ENOX1Q8TC92 643 aaKnown RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 FRS2Q8WU20 508 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 INO80BQ9C086 356 aaPredicted RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 GPCPD1Q9NPB8 672 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 SPATA7Q9P0W8 599 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 USP25Q9UHP3 1055 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 TNNT1P13805 278 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 NASPP49321 788 aaPredicted RBP5.8□□□□□ -1.48
RC3H1-202ENST00000367694 PACS1Q6VY07 963 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 TRIM42Q8IWZ5 723 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 FBXO18Q8NFZ0 1043 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 BICD1Q96G01 975 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 TBC1D7Q9P0N9 293 aa5.8□□□□□ -1.48
RC3H1-202ENST00000367694 TOPBP1Q92547 1522 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 KTN1Q86UP2 1357 aaKnown RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 MYL1P05976 194 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 MMEP08473 750 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 NSUN2Q08J23 767 aaKnown RBP eCLIP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 ISM2Q6H9L7 571 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 PLPP6Q8IY26 295 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 MYO1HQ8N1T3 1032 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 SNX21Q969T3 373 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 CDCA7Q9BWT1 371 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 TOP2BQ02880 1626 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms