RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 IP6K1Q92551 441 aa8.6□□□□□ -1.03
VTA1-202ENST00000367630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■□□□□ 10.8
VTA1-202ENST00000367630 COL3A1P02461 1466 aaPredicted RBP8.59□□□□□ -1.03
VTA1-202ENST00000367630 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
VTA1-202ENST00000367630 TUBB2AQ13885 445 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 TUBB2BQ9BVA1 445 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 CCDC112Q8NEF3 446 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 PPP1R9BQ96SB3 815 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 IQCEQ6IPM2 695 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 KSR2Q6VAB6 950 aa8.59□□□□□ -1.03
VTA1-202ENST00000367630 CWC15Q9P013 229 aaKnown RBP8.59□□□□□ -1.03
VTA1-202ENST00000367630 FILIP1LQ4L180 1135 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 LARP1BQ659C4 914 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 SRRTQ9BXP5 876 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 CGNQ9P2M7 1197 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 LINS1Q8NG48 757 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 GBP3Q9H0R5 595 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 FSD2A1L4K1 749 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 NOL7Q9UMY1 257 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 SDSP20132 328 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 STX1AQ16623 288 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 PPP4R3BQ5MIZ7 849 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 STX6O43752 255 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 IPO7O95373 1038 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 RBM27Q9P2N5 1060 aaKnown RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
VTA1-202ENST00000367630 KDRP35968 1356 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 SHPRHQ149N8 1683 aa8.58□□□□□ -1.04
VTA1-202ENST00000367630 ZSCAN12O43309 604 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 IGSF1Q8N6C5 1336 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 EIF2S2P20042 333 aaKnown RBP8.57□□□□□ -1.04
VTA1-202ENST00000367630 RNF41Q9H4P4 317 aaPredicted RBP8.57□□□□□ -1.04
VTA1-202ENST00000367630 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 NCOA3Q9Y6Q9 1424 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 TXLNAP40222 546 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 PPP2R5BQ15173 497 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 ZSCAN23Q3MJ62 389 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 AACSQ86V21 672 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 ZNHIT6Q9NWK9 470 aaKnown RBP8.57□□□□□ -1.04
VTA1-202ENST00000367630 OFD1O75665 1012 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 UQCRFS1P1P0C7P4 283 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
VTA1-202ENST00000367630 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
VTA1-202ENST00000367630 ZKSCAN5Q9Y2L8 839 aa8.57□□□□□ -1.04
VTA1-202ENST00000367630 TMX4Q9H1E5 349 aaPredicted RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 ALDH8A1Q9H2A2 487 aaPredicted RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 LUC7LQ9NQ29 371 aaKnown RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 CERS3Q8IU89 383 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 NRKQ7Z2Y5 1582 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 ABCC12Q96J65 1359 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 JAKMIP3Q5VZ66 844 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 TMTC2Q8N394 836 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 SMC2O95347 1197 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 GPR108Q9NPR9 543 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 RLBP1P12271 317 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 TTC39AQ5SRH9 613 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 JAKMIP1Q96N16 626 aaKnown RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 CDR1P51861 262 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 RRS1Q15050 365 aaKnown RBP8.56□□□□□ -1.04
VTA1-202ENST00000367630 BRAPQ7Z569 592 aa8.56□□□□□ -1.04
VTA1-202ENST00000367630 CABP4P57796 275 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 KCNG4Q8TDN1 519 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 PPP1R2P41236 205 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 CCDC83Q8IWF9 413 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 ERLIN1O75477 346 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 A0A087WZG4 1122 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 CHMLP26374 656 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 STK38Q15208 465 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 SYCP1Q15431 976 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 FAM200AQ8TCP9 573 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 ZNF287Q9HBT7 754 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 ELP1O95163 1332 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 ANTXR1Q9H6X2 564 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 FOXD4L1Q9NU39 408 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
VTA1-202ENST00000367630 GNAT2P19087 354 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 IL15P40933 162 aaPredicted RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 IQCDQ96DY2 449 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 CEP126Q9P2H0 1117 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 ZNF500O60304 480 aaPredicted RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 F13A1P00488 732 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 TPD52L1Q16890 204 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms