RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
CNIH4-202ENST00000366857 VPS72Q15906 364 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
CNIH4-202ENST00000366857 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 NEURL1BA8MQ27 555 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 H7C1W4 665 aa11.75□□□□□ -0.53
CNIH4-202ENST00000366857 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
CNIH4-202ENST00000366857 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
CNIH4-202ENST00000366857 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
CNIH4-202ENST00000366857 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CNIH4-202ENST00000366857 RGL2O15211 777 aa11.74□□□□□ -0.53
CNIH4-202ENST00000366857 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
CNIH4-202ENST00000366857 METTL22Q9BUU2 404 aaPredicted RBP11.74□□□□□ -0.53
CNIH4-202ENST00000366857 PLA2G12BQ9BX93 195 aa11.74□□□□□ -0.53
CNIH4-202ENST00000366857 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
CNIH4-202ENST00000366857 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
CNIH4-202ENST00000366857 CYP19A1P11511 503 aaPredicted RBP11.74□□□□□ -0.53
CNIH4-202ENST00000366857 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
CNIH4-202ENST00000366857 PI4KAP2A4QPH2 592 aa11.73□□□□□ -0.53
CNIH4-202ENST00000366857 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
CNIH4-202ENST00000366857 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
CNIH4-202ENST00000366857 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
CNIH4-202ENST00000366857 PI4KAP1Q8N8J0 262 aa11.73□□□□□ -0.53
CNIH4-202ENST00000366857 NEFMP07197 916 aa11.73□□□□□ -0.53
CNIH4-202ENST00000366857 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
CNIH4-202ENST00000366857 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 KCNB2Q92953 911 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 ZNF609O15014 1411 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 IL25Q9H293 177 aa11.72□□□□□ -0.53
CNIH4-202ENST00000366857 RAPGEF4Q8WZA2 1011 aa11.71□□□□□ -0.53
CNIH4-202ENST00000366857 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
CNIH4-202ENST00000366857 GCKRQ14397 625 aa11.71□□□□□ -0.53
CNIH4-202ENST00000366857 SASH1O94885 1247 aa11.71□□□□□ -0.54
CNIH4-202ENST00000366857 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.54
CNIH4-202ENST00000366857 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
CNIH4-202ENST00000366857 MAP3K2Q9Y2U5 619 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 IRS2Q9Y4H2 1338 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 RTL9Q8NET4 1388 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 CSF1RP07333 972 aa11.7□□□□□ -0.54
CNIH4-202ENST00000366857 DUOX1Q9NRD9 1551 aa11.69□□□□□ -0.54
CNIH4-202ENST00000366857 ANXA1P04083 346 aa11.69□□□□□ -0.54
CNIH4-202ENST00000366857 GNAI2P04899 355 aa11.69□□□□□ -0.54
CNIH4-202ENST00000366857 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
CNIH4-202ENST00000366857 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
CNIH4-202ENST00000366857 LRRFIP2Q9Y608 721 aaKnown RBP11.69□□□□□ -0.54
CNIH4-202ENST00000366857 UNC5CLQ8IV45 518 aa11.69□□□□□ -0.54
CNIH4-202ENST00000366857 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
CNIH4-202ENST00000366857 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
CNIH4-202ENST00000366857 VGLL2Q8N8G2 317 aa11.68□□□□□ -0.54
CNIH4-202ENST00000366857 GNAI3P08754 354 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 CWF19L2Q2TBE0 894 aaKnown RBP11.67□□□□□ -0.54
CNIH4-202ENST00000366857 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
CNIH4-202ENST00000366857 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 UBN2Q6ZU65 1347 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 PDE1AP54750 535 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
CNIH4-202ENST00000366857 TEFQ10587 303 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
CNIH4-202ENST00000366857 GREB1LQ9C091 1923 aaPredicted RBP11.67□□□□□ -0.54
CNIH4-202ENST00000366857 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
CNIH4-202ENST00000366857 TBC1D9Q6ZT07 1266 aa11.66□□□□□ -0.54
CNIH4-202ENST00000366857 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
CNIH4-202ENST00000366857 XAGE3Q8WTP9 111 aa11.66□□□□□ -0.54
CNIH4-202ENST00000366857 ITPK1Q13572 414 aa11.66□□□□□ -0.54
CNIH4-202ENST00000366857 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
CNIH4-202ENST00000366857 SRCIN1Q9C0H9 1055 aa11.66□□□□□ -0.54
CNIH4-202ENST00000366857 GRM8O00222 908 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 COPS6Q7L5N1 327 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
CNIH4-202ENST00000366857 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
CNIH4-202ENST00000366857 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
CNIH4-202ENST00000366857 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
CNIH4-202ENST00000366857 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
CNIH4-202ENST00000366857 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
CNIH4-202ENST00000366857 SDSP20132 328 aa11.64□□□□□ -0.55
CNIH4-202ENST00000366857 SNX21Q969T3 373 aa11.64□□□□□ -0.55
CNIH4-202ENST00000366857 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 USP26Q9BXU7 913 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 ABCC12Q96J65 1359 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
CNIH4-202ENST00000366857 CABP4P57796 275 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
CNIH4-202ENST00000366857 TOM1O60784 492 aa11.62□□□□□ -0.55
CNIH4-202ENST00000366857 A1BGP04217 495 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms