RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 DICER1Q9UPY3 1922 aaKnown RBP15.43■□□□□ 0.06
MRPL55-212ENST00000366739 SIPA1L3O60292 1781 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-212ENST00000366739 ST5P78524 1137 aa15.42■□□□□ 0.06
MRPL55-212ENST00000366739 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
MRPL55-212ENST00000366739 PIP4K2AP48426 406 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-212ENST00000366739 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-212ENST00000366739 NPM2Q86SE8 214 aaKnown RBP15.41■□□□□ 0.06
MRPL55-212ENST00000366739 DZIP3Q86Y13 1208 aaKnown RBP15.41■□□□□ 0.06
MRPL55-212ENST00000366739 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
MRPL55-212ENST00000366739 CEMIPQ8WUJ3 1361 aa15.4■□□□□ 0.06
MRPL55-212ENST00000366739 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
MRPL55-212ENST00000366739 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 C7orf43Q8WVR3 580 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
MRPL55-212ENST00000366739 CNTNAP1P78357 1384 aa15.38■□□□□ 0.05
MRPL55-212ENST00000366739 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
MRPL55-212ENST00000366739 FOXN1O15353 648 aa15.38■□□□□ 0.05
MRPL55-212ENST00000366739 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
MRPL55-212ENST00000366739 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-212ENST00000366739 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-212ENST00000366739 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-212ENST00000366739 ARFGEF2Q9Y6D5 1785 aa15.37■□□□□ 0.05
MRPL55-212ENST00000366739 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
MRPL55-212ENST00000366739 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
MRPL55-212ENST00000366739 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
MRPL55-212ENST00000366739 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-212ENST00000366739 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
MRPL55-212ENST00000366739 NPR1P16066 1061 aa15.36■□□□□ 0.05
MRPL55-212ENST00000366739 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
MRPL55-212ENST00000366739 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-212ENST00000366739 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
MRPL55-212ENST00000366739 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-212ENST00000366739 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
MRPL55-212ENST00000366739 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
MRPL55-212ENST00000366739 NPC1L1Q9UHC9 1359 aa15.35■□□□□ 0.05
MRPL55-212ENST00000366739 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
MRPL55-212ENST00000366739 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
MRPL55-212ENST00000366739 VEGFBP49765 207 aa15.34■□□□□ 0.05
MRPL55-212ENST00000366739 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
MRPL55-212ENST00000366739 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
MRPL55-212ENST00000366739 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 NBPF26B4DH59 902 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
MRPL55-212ENST00000366739 NBPF10Q6P3W6 841 aaKnown RBP15.33■□□□□ 0.04
MRPL55-212ENST00000366739 MCM10Q7L590 875 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 NBPF15Q8N660 670 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 HACL1Q9UJ83 578 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 SCN4AP35499 1836 aa15.33■□□□□ 0.04
MRPL55-212ENST00000366739 EPHX2P34913 555 aa15.32■□□□□ 0.04
MRPL55-212ENST00000366739 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-212ENST00000366739 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
MRPL55-212ENST00000366739 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
MRPL55-212ENST00000366739 PRDM10Q9NQV6 1147 aa15.32■□□□□ 0.04
MRPL55-212ENST00000366739 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
MRPL55-212ENST00000366739 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
MRPL55-212ENST00000366739 HLFQ16534 295 aa15.31■□□□□ 0.04
MRPL55-212ENST00000366739 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
MRPL55-212ENST00000366739 RNF123Q5XPI4 1314 aa15.31■□□□□ 0.04
MRPL55-212ENST00000366739 FZD9O00144 591 aa15.3■□□□□ 0.04
MRPL55-212ENST00000366739 IARSP41252 1262 aaKnown RBP15.3■□□□□ 0.04
MRPL55-212ENST00000366739 MAP1SQ66K74 1059 aaPredicted RBP15.3■□□□□ 0.04
MRPL55-212ENST00000366739 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
MRPL55-212ENST00000366739 ADAMTSL1Q8N6G6 1762 aa15.3■□□□□ 0.04
MRPL55-212ENST00000366739 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
MRPL55-212ENST00000366739 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
MRPL55-212ENST00000366739 CFAP53Q96M91 514 aa15.29■□□□□ 0.04
MRPL55-212ENST00000366739 WBP1LQ9NX94 342 aa15.29■□□□□ 0.04
MRPL55-212ENST00000366739 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
MRPL55-212ENST00000366739 RGL2O15211 777 aa15.28■□□□□ 0.04
MRPL55-212ENST00000366739 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-212ENST00000366739 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-212ENST00000366739 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
MRPL55-212ENST00000366739 LBX1P52954 281 aa15.28■□□□□ 0.04
MRPL55-212ENST00000366739 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
MRPL55-212ENST00000366739 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-212ENST00000366739 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
MRPL55-212ENST00000366739 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
MRPL55-212ENST00000366739 GPC2Q8N158 579 aa15.27■□□□□ 0.04
MRPL55-212ENST00000366739 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
MRPL55-212ENST00000366739 COL4A5P29400 1685 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 DEFB115Q30KQ5 88 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 CRY2Q49AN0 593 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 PSMD1Q99460 953 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 MIS18AQ9NYP9 233 aa15.26■□□□□ 0.03
MRPL55-212ENST00000366739 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
MRPL55-212ENST00000366739 SLC51AQ86UW1 340 aa15.25■□□□□ 0.03
MRPL55-212ENST00000366739 NGEFQ8N5V2 710 aa15.25■□□□□ 0.03
MRPL55-212ENST00000366739 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
MRPL55-212ENST00000366739 ABT1Q9ULW3 272 aaKnown RBP15.25■□□□□ 0.03
MRPL55-212ENST00000366739 GJA3Q9Y6H8 435 aa15.25■□□□□ 0.03
MRPL55-212ENST00000366739 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
MRPL55-212ENST00000366739 TAF7Q15545 349 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-212ENST00000366739 DDX21Q9NR30 783 aaKnown RBP eCLIP15.24■□□□□ 0.03
MRPL55-212ENST00000366739 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms