RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 DICER1Q9UPY3 1922 aaKnown RBP10.86□□□□□ -0.67
RNU4-59P-201ENST00000364447 PRAMEF22A3QJZ6 481 aa10.86□□□□□ -0.67
RNU4-59P-201ENST00000364447 FSTL1Q12841 308 aa10.86□□□□□ -0.67
RNU4-59P-201ENST00000364447 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 NFKBIEO00221 500 aa10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 C21orf2O43822 256 aa10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 NBPF5PQ86XG9 351 aaPredicted RBP10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 SLX4Q8IY92 1834 aa10.85□□□□□ -0.67
RNU4-59P-201ENST00000364447 GLTPD2A6NH11 291 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 VEGFAP15692 232 aaPredicted RBP10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 PRELPP51888 382 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 STYK1Q6J9G0 422 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 CLEC4GQ6UXB4 293 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
RNU4-59P-201ENST00000364447 SRGNP10124 158 aa10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 ERFEQ4G0M1 354 aa10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 MASTLQ96GX5 879 aa10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
RNU4-59P-201ENST00000364447 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 TPTE2Q6XPS3 522 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 TAOK3Q9H2K8 898 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 PNNQ9H307 717 aaKnown RBP10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 MIS18AQ9NYP9 233 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
RNU4-59P-201ENST00000364447 NUP98P52948 1817 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 FAM177BA6PVY3 158 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 RGL2O15211 777 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 NPR1P16066 1061 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 GTF2E1P29083 439 aaPredicted RBP10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 HTRA3P83110 453 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 NFE2L2Q16236 605 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 DNAJC5GQ8N7S2 189 aa10.81□□□□□ -0.68
RNU4-59P-201ENST00000364447 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
RNU4-59P-201ENST00000364447 PLEKHF1Q96S99 279 aa10.8□□□□□ -0.68
RNU4-59P-201ENST00000364447 HLFQ16534 295 aa10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 CCDC93Q567U6 631 aa10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 THUMPD2Q9BTF0 503 aaKnown RBP10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
RNU4-59P-201ENST00000364447 MYL6BP14649 208 aa10.78□□□□□ -0.68
RNU4-59P-201ENST00000364447 EIF4A1P60842 406 aaKnown RBP10.78□□□□□ -0.68
RNU4-59P-201ENST00000364447 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
RNU4-59P-201ENST00000364447 MAP3K15Q6ZN16 1313 aa10.78□□□□□ -0.68
RNU4-59P-201ENST00000364447 KLRG2A4D1S0 409 aaPredicted RBP10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 ALDH1B1P30837 517 aa10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 TSPYL4Q9UJ04 414 aa10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 SCN4AP35499 1836 aa10.77□□□□□ -0.69
RNU4-59P-201ENST00000364447 POTECB2RU33 542 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 DDNO94850 711 aaPredicted RBP10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 RALBP1Q15311 655 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 RTKN2Q8IZC4 609 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 C7orf43Q8WVR3 580 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 ERBB4Q15303 1308 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
RNU4-59P-201ENST00000364447 IQCA1LA6NCM1 817 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 GPTP24298 496 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 RIPK4P57078 832 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 JMYQ8N9B5 988 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 ZNF277Q9NRM2 450 aaPredicted RBP10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 RIC1Q4ADV7 1423 aa10.75□□□□□ -0.69
RNU4-59P-201ENST00000364447 CRY2Q49AN0 593 aa10.74□□□□□ -0.69
RNU4-59P-201ENST00000364447 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
RNU4-59P-201ENST00000364447 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
RNU4-59P-201ENST00000364447 UBN2Q6ZU65 1347 aa10.74□□□□□ -0.69
RNU4-59P-201ENST00000364447 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 IARSP41252 1262 aaKnown RBP10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 PPP1R42Q7Z4L9 355 aa10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
RNU4-59P-201ENST00000364447 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 SUSD4Q5VX71 490 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 SYNE4Q8N205 404 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms