RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 PDGFAP04085 211 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 RPLP1P05386 114 aaKnown RBP5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZNF394Q53GI3 561 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TTC16Q8NEE8 873 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EDEM1Q92611 657 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 OSBPL2Q9H1P3 480 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 IL21Q9HBE4 155 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 FAM13BQ9NYF5 915 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 USP31Q70CQ4 1352 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EIF1AYO14602 144 aaKnown RBP5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZAP70P43403 619 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 HIRAP54198 1017 aaPredicted RBP5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 NFE2L2Q16236 605 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TBCELQ5QJ74 424 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 NBPF15Q8N660 670 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 MTRQ99707 1265 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PIF1Q9H611 641 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CWC22Q9HCG8 908 aaKnown RBP5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SRA1Q9HD15 236 aaKnown RBP5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TMPRSS4Q9NRS4 437 aa5.35□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SERTM1A2A2V5 107 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CPNE3O75131 537 aaKnown RBP5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 GJA8P48165 433 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 WNT7BP56706 349 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TEAD4Q15561 434 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 RTN1Q16799 776 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 FAM26DQ5JW98 314 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 MCF2L2Q86YR7 1114 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ETFBKMTQ8IXQ9 262 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZNF784Q8NCA9 323 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 XAGE2Q96GT9 111 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CDK15Q96Q40 435 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 GGT7Q9UJ14 662 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EML1O00423 815 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 S1PR4O95977 384 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 FGRP09769 529 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ATF4P18848 351 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NOS2P35228 1153 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ORC1Q13415 861 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 DGKZQ13574 1117 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TAF1CQ15572 869 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NBPF6Q5VWK0 638 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ALDH16A1Q8IZ83 802 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 IFT43Q96FT9 208 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NGLY1Q96IV0 654 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SPACA7Q96KW9 195 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NBPF4Q96M43 638 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 POLR3GLQ9BT43 218 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 C12orf49Q9H741 205 aa5.33□□□□□ -1.56
RNU6-1249P-201ENST00000363237 LILRA1O75019 489 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 IBSPP21815 317 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 HSD3B2P26439 372 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ST13P50502 369 aaKnown RBP5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 IGBP1P78318 339 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ARID5BQ14865 1188 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 C8orf34Q49A92 452 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TJAP1Q5JTD0 557 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 THSD4Q6ZMP0 1018 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 CKAP2LQ8IYA6 745 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NLGN1Q8N2Q7 840 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 MPNDQ8N594 471 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 NUDT16Q96DE0 195 aaKnown RBP5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 MRFAP1L1Q96HT8 127 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 BRINP2Q9C0B6 783 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 SRCIN1Q9C0H9 1055 aa5.32□□□□□ -1.56
RNU6-1249P-201ENST00000363237 FSHRP23945 695 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TRIM32Q13049 653 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TLR1Q15399 786 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 HIF1AQ16665 826 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 PTPROQ16827 1216 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ANKRD13DQ6ZTN6 518 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 CCDC116Q8IYX3 515 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 GPR152Q8TDT2 470 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ZNF516Q92618 1163 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 MKL1Q969V6 931 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 GPRASP2Q96D09 838 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ESYT1Q9BSJ8 1104 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 FAM8A1Q9UBU6 413 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ZNF232Q9UNY5 417 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 HCN4Q9Y3Q4 1203 aa5.31□□□□□ -1.56
RNU6-1249P-201ENST00000363237 hCG_2014768A0A024R1R8 64 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 OPLAHO14841 1288 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 MARCH6O60337 910 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 IL2RAP01589 272 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 GRM5P41594 1212 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 PAK2Q13177 524 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 BMS1Q14692 1282 aaKnown RBP5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TCEAL1Q15170 157 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 RNF187Q5TA31 235 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 C1orf53Q5VUE5 145 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 TREML1Q86YW5 311 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 EHBP1Q8NDI1 1231 aa5.3□□□□□ -1.56
RNU6-1249P-201ENST00000363237 ZCRB1Q8TBF4 217 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms