RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 SERPINB2P05120 415 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 HMGB2P26583 209 aaKnown RBP4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 LMOD3Q0VAK6 560 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 HLFQ16534 295 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 FAM9BQ8IZU0 186 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 PNISRQ8TF01 805 aaKnown RBP4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 TEX13AQ9BXU3 409 aaPredicted RBP4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZBTB3Q9H5J0 574 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 MBIPQ9NS73 344 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 BCS1LQ9Y276 419 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 FER1L6Q2WGJ9 1857 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 DDX60Q8IY21 1712 aaKnown RBP4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 ABCC12Q96J65 1359 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 DICER1Q9UPY3 1922 aaKnown RBP4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 A0A087WZG4 1122 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 ELL2O00472 640 aaPredicted RBP4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 CHL1O00533 1208 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 KCNA3P22001 575 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 GPTP24298 496 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 PDIA6Q15084 440 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 PRR5LQ6MZQ0 368 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 SLC51AQ86UW1 340 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 TSR2Q969E8 191 aaKnown RBP4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF219Q9P2Y4 722 aaPredicted RBP4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 SPEF2Q9C093 1822 aa4.55□□□□□ -1.68
RNU4-35P-201ENST00000362588 CACNA1FO60840 1977 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 COL4A1P02462 1669 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 UBN2Q6ZU65 1347 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 TCERG1O14776 1098 aaKnown RBP4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF853P0CG23 659 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 RASSF7Q02833 373 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 AIMP1Q12904 312 aaKnown RBP4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 DUSP27Q5VZP5 1158 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 LRP10Q7Z4F1 713 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 NPM2Q86SE8 214 aaKnown RBP4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 NUTM1Q86Y26 1132 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 C2CD5Q86YS7 1000 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 TSPYL6Q8N831 410 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF526Q8TF50 670 aaPredicted RBP4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 SETDB2Q96T68 719 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 CHPF2Q9P2E5 772 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 NIP7Q9Y221 180 aaKnown RBP eCLIP4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 MYH3P11055 1940 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 ATP10DQ9P241 1426 aa4.54□□□□□ -1.68
RNU4-35P-201ENST00000362588 MAP3K15Q6ZN16 1313 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 NPHP1O15259 732 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 TGFB2P61812 414 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 HDGFL1Q5TGJ6 251 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 KIF6Q6ZMV9 814 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 ARHGAP27Q6ZUM4 889 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 COPS6Q7L5N1 327 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 NBPF5PQ86XG9 351 aaPredicted RBP4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 WWC1Q8IX03 1113 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 C8orf58Q8NAV2 365 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF784Q8NCA9 323 aaPredicted RBP4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 XAGE3Q8WTP9 111 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF622Q969S3 477 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 CFAP44Q96MT7 982 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 SPINK5Q9NQ38 1064 aaPredicted RBP4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 PIM2Q9P1W9 311 aa4.53□□□□□ -1.68
RNU4-35P-201ENST00000362588 ADCY9O60503 1353 aa4.53□□□□□ -1.69
RNU4-35P-201ENST00000362588 ERBB4Q15303 1308 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 GRIN3BO60391 1043 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 PRELPP51888 382 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 GNAI1P63096 354 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 ST5P78524 1137 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 ERFEQ4G0M1 354 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 DALRD3Q5D0E6 543 aaKnown RBP4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 SUSD4Q5VX71 490 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 OLFM4Q6UX06 510 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 CLEC4GQ6UXB4 293 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 GIGYF2Q6Y7W6 1299 aaKnown RBP4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 C3orf67Q6ZVT6 689 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 DDX21Q9NR30 783 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 IFT57Q9NWB7 429 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 BABAM1Q9NWV8 329 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF652Q9Y2D9 606 aa4.52□□□□□ -1.69
RNU4-35P-201ENST00000362588 FANCIQ9NVI1 1328 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 ERVV-1B6SEH8 477 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 ATP5J2-PTCD1G3V325 749 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 H0YIN7 160 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 NFKBIEO00221 500 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 C21orf2O43822 256 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 NTSR2O95665 410 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 GTF2E1P29083 439 aaPredicted RBP4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 RTL5Q5HYW3 569 aaPredicted RBP4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 G2E3Q7L622 706 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF34Q8IZ26 560 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 TTLL6Q8N841 843 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 JARID2Q92833 1246 aaPredicted RBP4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 BRIP1Q9BX63 1249 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 LRRC37AA6NMS7 1700 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 COL4A5P29400 1685 aa4.51□□□□□ -1.69
RNU4-35P-201ENST00000362588 A0A1B0GUL6 1792 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 HOXB7P09629 217 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 SRGNP10124 158 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 HCLS1P14317 486 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms