RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TPM3P06753 285 aa22.95■■□□□ 1.26
CMTM3-201ENST00000361909 TMEM87AQ8NBN3 555 aa22.95■■□□□ 1.26
CMTM3-201ENST00000361909 ADAMTS7Q9UKP4 1686 aa22.94■■□□□ 1.26
CMTM3-201ENST00000361909 MIS18AQ9NYP9 233 aa22.94■■□□□ 1.26
CMTM3-201ENST00000361909 PHLPP1O60346 1717 aa22.94■■□□□ 1.26
CMTM3-201ENST00000361909 RNMTO43148 476 aaKnown RBP22.93■■□□□ 1.26
CMTM3-201ENST00000361909 LGR6Q9HBX8 967 aa22.93■■□□□ 1.26
CMTM3-201ENST00000361909 MEGF6O75095 1541 aa22.93■■□□□ 1.26
CMTM3-201ENST00000361909 COL16A1Q07092 1604 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-201ENST00000361909 PKD1L3Q7Z443 1732 aa22.93■■□□□ 1.26
CMTM3-201ENST00000361909 RGS12O14924 1447 aa22.92■■□□□ 1.26
CMTM3-201ENST00000361909 EPB41L2O43491 1005 aaKnown RBP22.92■■□□□ 1.26
CMTM3-201ENST00000361909 ZNF710Q8N1W2 664 aa22.92■■□□□ 1.26
CMTM3-201ENST00000361909 CARD10Q9BWT7 1032 aa22.92■■□□□ 1.26
CMTM3-201ENST00000361909 CEP85Q6P2H3 762 aa22.91■■□□□ 1.26
CMTM3-201ENST00000361909 TOM1L2Q6ZVM7 507 aa22.91■■□□□ 1.26
CMTM3-201ENST00000361909 DIAPH3Q9NSV4 1193 aa22.91■■□□□ 1.26
CMTM3-201ENST00000361909 WDR33Q9C0J8 1336 aaKnown RBP22.91■■□□□ 1.26
CMTM3-201ENST00000361909 CCDC183Q5T5S1 534 aa22.91■■□□□ 1.26
CMTM3-201ENST00000361909 COL14A1Q05707 1796 aaKnown RBP22.91■■□□□ 1.26
CMTM3-201ENST00000361909 NEK4P51957 841 aa22.9■■□□□ 1.26
CMTM3-201ENST00000361909 TEFQ10587 303 aa22.9■■□□□ 1.26
CMTM3-201ENST00000361909 HMMRO75330 724 aa22.9■■□□□ 1.26
CMTM3-201ENST00000361909 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
CMTM3-201ENST00000361909 MPRIPQ6WCQ1 1025 aa22.9■■□□□ 1.26
CMTM3-201ENST00000361909 PARP4Q9UKK3 1724 aaKnown RBP22.89■■□□□ 1.26
CMTM3-201ENST00000361909 IFNL2Q8IZJ0 200 aa22.89■■□□□ 1.26
CMTM3-201ENST00000361909 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.25
CMTM3-201ENST00000361909 EVA1CP58658 441 aa22.89■■□□□ 1.25
CMTM3-201ENST00000361909 CHAF1AQ13111 956 aaPredicted RBP22.89■■□□□ 1.25
CMTM3-201ENST00000361909 C16orf71Q8IYS4 520 aaPredicted RBP22.89■■□□□ 1.25
CMTM3-201ENST00000361909 PRDM10Q9NQV6 1147 aa22.89■■□□□ 1.25
CMTM3-201ENST00000361909 PHKG2P15735 406 aa22.88■■□□□ 1.25
CMTM3-201ENST00000361909 PTPRCP08575 1304 aa22.88■■□□□ 1.25
CMTM3-201ENST00000361909 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
CMTM3-201ENST00000361909 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-201ENST00000361909 SCN11AQ9UI33 1791 aa22.86■■□□□ 1.25
CMTM3-201ENST00000361909 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
CMTM3-201ENST00000361909 ZHX1Q9UKY1 873 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-201ENST00000361909 OTUD7AQ8TE49 926 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-201ENST00000361909 BTBD11A6QL63 1104 aa22.85■■□□□ 1.25
CMTM3-201ENST00000361909 ADCY5O95622 1261 aa22.85■■□□□ 1.25
CMTM3-201ENST00000361909 HOXB7P09629 217 aa22.85■■□□□ 1.25
CMTM3-201ENST00000361909 TAF3Q5VWG9 929 aa22.85■■□□□ 1.25
CMTM3-201ENST00000361909 CACNA1FO60840 1977 aa22.85■■□□□ 1.25
CMTM3-201ENST00000361909 ARID3AQ99856 593 aa22.84■■□□□ 1.25
CMTM3-201ENST00000361909 PPP4R3BQ5MIZ7 849 aa22.84■■□□□ 1.25
CMTM3-201ENST00000361909 LARP1Q6PKG0 1096 aaKnown RBP22.84■■□□□ 1.25
CMTM3-201ENST00000361909 BTG4Q9NY30 223 aa22.84■■□□□ 1.25
CMTM3-201ENST00000361909 USP25Q9UHP3 1055 aa22.84■■□□□ 1.25
CMTM3-201ENST00000361909 UBAP1LF5GYI3 381 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 IL2RBP14784 551 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 MX1P20591 662 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 EIF4A1P60842 406 aaKnown RBP22.83■■□□□ 1.25
CMTM3-201ENST00000361909 PIP4K2BP78356 416 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 CCDC30Q5VVM6 783 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 ESYT1Q9BSJ8 1104 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 STRN4Q9NRL3 753 aa22.83■■□□□ 1.25
CMTM3-201ENST00000361909 PDCL2Q8N4E4 241 aa22.83■■□□□ 1.24
CMTM3-201ENST00000361909 FEZ1Q99689 392 aa22.83■■□□□ 1.24
CMTM3-201ENST00000361909 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.24
CMTM3-201ENST00000361909 PDE1AP54750 535 aa22.82■■□□□ 1.24
CMTM3-201ENST00000361909 ANKRD7Q92527 254 aa22.82■■□□□ 1.24
CMTM3-201ENST00000361909 RPAP1Q9BWH6 1393 aaPredicted RBP22.82■■□□□ 1.24
CMTM3-201ENST00000361909 KDM6AO15550 1401 aaPredicted RBP22.82■■□□□ 1.24
CMTM3-201ENST00000361909 CYP27B1O15528 508 aa22.82■■□□□ 1.24
CMTM3-201ENST00000361909 KDM4AO75164 1064 aa22.82■■□□□ 1.24
CMTM3-201ENST00000361909 SYCP1Q15431 976 aa22.82■■□□□ 1.24
CMTM3-201ENST00000361909 ZCRB1Q8TBF4 217 aaKnown RBP22.82■■□□□ 1.24
CMTM3-201ENST00000361909 GOLGA6L6A8MZA4 724 aa22.81■■□□□ 1.24
CMTM3-201ENST00000361909 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
CMTM3-201ENST00000361909 CHAMP1Q96JM3 812 aa22.81■■□□□ 1.24
CMTM3-201ENST00000361909 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
CMTM3-201ENST00000361909 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
CMTM3-201ENST00000361909 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
CMTM3-201ENST00000361909 UBE2HP62256 183 aa22.8■■□□□ 1.24
CMTM3-201ENST00000361909 FOXD4L5Q5VV16 416 aaPredicted RBP22.8■■□□□ 1.24
CMTM3-201ENST00000361909 FOXD4L4Q8WXT5 416 aaPredicted RBP22.8■■□□□ 1.24
CMTM3-201ENST00000361909 STK31Q9BXU1 1019 aa22.8■■□□□ 1.24
CMTM3-201ENST00000361909 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
CMTM3-201ENST00000361909 MRC1P22897 1456 aa22.8■■□□□ 1.24
CMTM3-201ENST00000361909 CTIFO43310 598 aaKnown RBP22.79■■□□□ 1.24
CMTM3-201ENST00000361909 KIAA1524Q8TCG1 905 aa22.79■■□□□ 1.24
CMTM3-201ENST00000361909 ATP6V1DQ9Y5K8 247 aa22.79■■□□□ 1.24
CMTM3-201ENST00000361909 CBX1P83916 185 aa22.79■■□□□ 1.24
CMTM3-201ENST00000361909 TTC12Q9H892 705 aaPredicted RBP22.79■■□□□ 1.24
CMTM3-201ENST00000361909 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
CMTM3-201ENST00000361909 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
CMTM3-201ENST00000361909 GADD45BO75293 160 aaPredicted RBP22.77■■□□□ 1.24
CMTM3-201ENST00000361909 SALL3Q9BXA9 1300 aa22.77■■□□□ 1.24
CMTM3-201ENST00000361909 NKX1-1Q15270 411 aaPredicted RBP22.77■■□□□ 1.24
CMTM3-201ENST00000361909 ATP2B3Q16720 1220 aa22.76■■□□□ 1.23
CMTM3-201ENST00000361909 AOX1Q06278 1338 aa22.76■■□□□ 1.23
CMTM3-201ENST00000361909 TCHHQ07283 1943 aa22.75■■□□□ 1.23
CMTM3-201ENST00000361909 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
CMTM3-201ENST00000361909 KCNQ3O43525 872 aa22.74■■□□□ 1.23
CMTM3-201ENST00000361909 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-201ENST00000361909 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
CMTM3-201ENST00000361909 HDGFL1Q5TGJ6 251 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms