RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 FOXD4L1Q9NU39 408 aa27.61■■■□□ 2.01
LDB1-201ENST00000361198 GBP4Q96PP9 640 aa27.61■■■□□ 2.01
LDB1-201ENST00000361198 OS9Q13438 667 aaPredicted RBP27.6■■■□□ 2.01
LDB1-201ENST00000361198 ZCRB1Q8TBF4 217 aaKnown RBP27.6■■■□□ 2.01
LDB1-201ENST00000361198 PA2G4Q9UQ80 394 aaKnown RBP27.6■■■□□ 2.01
LDB1-201ENST00000361198 ISY1Q9ULR0 285 aaKnown RBP27.59■■■□□ 2.01
LDB1-201ENST00000361198 PARP4Q9UKK3 1724 aaKnown RBP27.59■■■□□ 2.01
LDB1-201ENST00000361198 BICC1Q9H694 974 aaKnown RBP27.58■■■□□ 2.01
LDB1-201ENST00000361198 PCDH11XQ9BZA7 1347 aa27.58■■■□□ 2.01
LDB1-201ENST00000361198 PCDH11YQ9BZA8 1340 aa27.58■■■□□ 2.01
LDB1-201ENST00000361198 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
LDB1-201ENST00000361198 MAP4K4O95819 1239 aaPredicted RBP27.57■■■□□ 2
LDB1-201ENST00000361198 NEXNQ0ZGT2 675 aa27.57■■■□□ 2
LDB1-201ENST00000361198 ANKRD13DQ6ZTN6 518 aa27.57■■■□□ 2
LDB1-201ENST00000361198 MYD88Q99836 296 aa27.57■■■□□ 2
LDB1-201ENST00000361198 METTL22Q9BUU2 404 aaPredicted RBP27.57■■■□□ 2
LDB1-201ENST00000361198 ABCA3Q99758 1704 aa27.56■■■□□ 2
LDB1-201ENST00000361198 PTMSP20962 102 aa27.56■■■□□ 2
LDB1-201ENST00000361198 CLEC17AQ6ZS10 378 aa27.56■■■□□ 2
LDB1-201ENST00000361198 MRE11P49959 708 aa27.55■■■□□ 2
LDB1-201ENST00000361198 GLI3P10071 1580 aa27.55■■■□□ 2
LDB1-201ENST00000361198 AK9Q5TCS8 1911 aa27.55■■■□□ 2
LDB1-201ENST00000361198 GCKRQ14397 625 aa27.55■■■□□ 2
LDB1-201ENST00000361198 CLASRPQ8N2M8 674 aaKnown RBP27.54■■■□□ 2
LDB1-201ENST00000361198 CARD10Q9BWT7 1032 aa27.54■■■□□ 2
LDB1-201ENST00000361198 ANO2Q9NQ90 1003 aa27.54■■■□□ 2
LDB1-201ENST00000361198 STRN4Q9NRL3 753 aa27.54■■■□□ 2
LDB1-201ENST00000361198 SKOR2Q2VWA4 1001 aaPredicted RBP27.53■■■□□ 2
LDB1-201ENST00000361198 IL25Q9H293 177 aa27.53■■■□□ 2
LDB1-201ENST00000361198 USP42Q9H9J4 1324 aaKnown RBP27.53■■■□□ 2
LDB1-201ENST00000361198 IL2RBP14784 551 aa27.53■■■□□ 2
LDB1-201ENST00000361198 ST18O60284 1047 aa27.52■■■□□ 2
LDB1-201ENST00000361198 ANO8Q9HCE9 1232 aaPredicted RBP27.52■■■□□ 2
LDB1-201ENST00000361198 ERC1Q8IUD2 1116 aa27.52■■■□□ 2
LDB1-201ENST00000361198 TTC41PQ6P2S7 1318 aa27.51■■□□□ 1.99
LDB1-201ENST00000361198 ERVV-2B6SEH9 535 aa27.5■■□□□ 1.99
LDB1-201ENST00000361198 NKX1-1Q15270 411 aaPredicted RBP27.5■■□□□ 1.99
LDB1-201ENST00000361198 CNTROBQ8N137 903 aa27.5■■□□□ 1.99
LDB1-201ENST00000361198 DDX54Q8TDD1 881 aaKnown RBP27.5■■□□□ 1.99
LDB1-201ENST00000361198 PANK2Q9BZ23 570 aa27.5■■□□□ 1.99
LDB1-201ENST00000361198 PALD1Q9ULE6 856 aa27.5■■□□□ 1.99
LDB1-201ENST00000361198 LAMB4A4D0S4 1761 aa27.49■■□□□ 1.99
LDB1-201ENST00000361198 EPHA10Q5JZY3 1008 aa27.49■■□□□ 1.99
LDB1-201ENST00000361198 GLRX3O76003 335 aaKnown RBP27.48■■□□□ 1.99
LDB1-201ENST00000361198 SASH1O94885 1247 aa27.48■■□□□ 1.99
LDB1-201ENST00000361198 EVA1CP58658 441 aa27.48■■□□□ 1.99
LDB1-201ENST00000361198 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.48■■□□□ 1.99
LDB1-201ENST00000361198 NHSL1Q5SYE7 1610 aa27.48■■□□□ 1.99
LDB1-201ENST00000361198 MCCP23508 829 aa27.47■■□□□ 1.99
LDB1-201ENST00000361198 GRPEL1Q9HAV7 217 aa27.47■■□□□ 1.99
LDB1-201ENST00000361198 G3BP1Q13283 466 aaKnown RBP eCLIP27.47■■□□□ 1.99
LDB1-201ENST00000361198 JARID2Q92833 1246 aaPredicted RBP27.47■■□□□ 1.99
LDB1-201ENST00000361198 ECHDC1Q9NTX5 307 aa27.47■■□□□ 1.99
LDB1-201ENST00000361198 SHANK3Q9BYB0 1731 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 NBPF26B4DH59 902 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 IFIT2P09913 472 aaKnown RBP27.46■■□□□ 1.99
LDB1-201ENST00000361198 NBPF14Q5TI25 921 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 NBPF10Q6P3W6 841 aaKnown RBP27.46■■□□□ 1.99
LDB1-201ENST00000361198 NBPF15Q8N660 670 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 ARXQ96QS3 562 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 ARFGEF2Q9Y6D5 1785 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 AACSQ86V21 672 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 KLHDC4Q8TBB5 520 aa27.46■■□□□ 1.99
LDB1-201ENST00000361198 ATP5J2-PTCD1G3V325 749 aa27.45■■□□□ 1.98
LDB1-201ENST00000361198 PTCD1O75127 700 aaKnown RBP27.45■■□□□ 1.98
LDB1-201ENST00000361198 SSFA2P28290 1259 aa27.45■■□□□ 1.98
LDB1-201ENST00000361198 NEK4P51957 841 aa27.45■■□□□ 1.98
LDB1-201ENST00000361198 SIL1Q9H173 461 aa27.45■■□□□ 1.98
LDB1-201ENST00000361198 RRAGDQ9NQL2 400 aaPredicted RBP27.45■■□□□ 1.98
LDB1-201ENST00000361198 UBR2Q8IWV8 1755 aa27.45■■□□□ 1.98
LDB1-201ENST00000361198 AFDNP55196 1824 aaKnown RBP27.45■■□□□ 1.98
LDB1-201ENST00000361198 ANAPC15P60006 121 aa27.44■■□□□ 1.98
LDB1-201ENST00000361198 PLBD2Q8NHP8 589 aa27.44■■□□□ 1.98
LDB1-201ENST00000361198 SGSM2O43147 1006 aa27.44■■□□□ 1.98
LDB1-201ENST00000361198 EAF2Q96CJ1 260 aaPredicted RBP27.44■■□□□ 1.98
LDB1-201ENST00000361198 ERBB4Q15303 1308 aa27.43■■□□□ 1.98
LDB1-201ENST00000361198 GPATCH3Q96I76 525 aa27.43■■□□□ 1.98
LDB1-201ENST00000361198 KCPQ6ZWJ8 1503 aa27.43■■□□□ 1.98
LDB1-201ENST00000361198 EPB41L2O43491 1005 aaKnown RBP27.42■■□□□ 1.98
LDB1-201ENST00000361198 UBE3BQ7Z3V4 1068 aa27.42■■□□□ 1.98
LDB1-201ENST00000361198 IL17RAQ96F46 866 aa27.41■■□□□ 1.98
LDB1-201ENST00000361198 CWC27Q6UX04 472 aaKnown RBP27.41■■□□□ 1.98
LDB1-201ENST00000361198 A0A087WZG4 1122 aa27.4■■□□□ 1.98
LDB1-201ENST00000361198 GOLGA6L22H0YM25 854 aa27.4■■□□□ 1.98
LDB1-201ENST00000361198 A1BGP04217 495 aa27.4■■□□□ 1.98
LDB1-201ENST00000361198 CYP2E1P05181 493 aaPredicted RBP27.4■■□□□ 1.98
LDB1-201ENST00000361198 NUCB2P80303 420 aa27.4■■□□□ 1.98
LDB1-201ENST00000361198 CCDC8Q9H0W5 538 aaPredicted RBP27.4■■□□□ 1.98
LDB1-201ENST00000361198 PAPPAQ13219 1627 aa27.4■■□□□ 1.98
LDB1-201ENST00000361198 BAG4O95429 457 aaKnown RBP27.39■■□□□ 1.98
LDB1-201ENST00000361198 HSPA4P34932 840 aa27.39■■□□□ 1.98
LDB1-201ENST00000361198 TTLL7Q6ZT98 887 aa27.39■■□□□ 1.98
LDB1-201ENST00000361198 ZGPATQ8N5A5 531 aaKnown RBP27.39■■□□□ 1.98
LDB1-201ENST00000361198 CWC22Q9HCG8 908 aaKnown RBP27.38■■□□□ 1.97
LDB1-201ENST00000361198 TLR7Q9NYK1 1049 aaKnown RBP27.38■■□□□ 1.97
LDB1-201ENST00000361198 RAD50Q92878 1312 aa27.38■■□□□ 1.97
LDB1-201ENST00000361198 RABL6Q3YEC7 729 aaPredicted RBP27.38■■□□□ 1.97
LDB1-201ENST00000361198 GAS2L3Q86XJ1 694 aa27.38■■□□□ 1.97
LDB1-201ENST00000361198 LSG1Q9H089 658 aaKnown RBP27.38■■□□□ 1.97
LDB1-201ENST00000361198 BTG4Q9NY30 223 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms