RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 ARFGEF2Q9Y6D5 1785 aa26.25■■□□□ 1.79
MAP1LC3A-201ENST00000360668 CYP19A1P11511 503 aaPredicted RBP26.25■■□□□ 1.79
MAP1LC3A-201ENST00000360668 KCNQ2O43526 872 aa26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 RBM19Q9Y4C8 960 aaKnown RBP26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 NHSQ6T4R5 1651 aa26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 HMMRO75330 724 aa26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 FAM182BQ5T319 152 aa26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 PALLDQ8WX93 1383 aa26.24■■□□□ 1.79
MAP1LC3A-201ENST00000360668 HDAC5Q9UQL6 1122 aa26.23■■□□□ 1.79
MAP1LC3A-201ENST00000360668 NUP188Q5SRE5 1749 aa26.23■■□□□ 1.79
MAP1LC3A-201ENST00000360668 DCTPP1Q9H773 170 aa26.22■■□□□ 1.79
MAP1LC3A-201ENST00000360668 LRRFIP2Q9Y608 721 aaKnown RBP26.22■■□□□ 1.79
MAP1LC3A-201ENST00000360668 ZNF831Q5JPB2 1677 aa26.22■■□□□ 1.79
MAP1LC3A-201ENST00000360668 LOC102724428A0A0B4J2F2 783 aa26.21■■□□□ 1.79
MAP1LC3A-201ENST00000360668 IGKV5-2P06315 115 aa26.21■■□□□ 1.79
MAP1LC3A-201ENST00000360668 SIK1P57059 783 aa26.21■■□□□ 1.79
MAP1LC3A-201ENST00000360668 CWF19L2Q2TBE0 894 aaKnown RBP26.21■■□□□ 1.79
MAP1LC3A-201ENST00000360668 UTYO14607 1347 aa26.2■■□□□ 1.79
MAP1LC3A-201ENST00000360668 NUCB1Q02818 461 aa26.2■■□□□ 1.79
MAP1LC3A-201ENST00000360668 TTLL7Q6ZT98 887 aa26.2■■□□□ 1.79
MAP1LC3A-201ENST00000360668 MYD88Q99836 296 aa26.2■■□□□ 1.79
MAP1LC3A-201ENST00000360668 C9orf78Q9NZ63 289 aaPredicted RBP26.2■■□□□ 1.79
MAP1LC3A-201ENST00000360668 NEURL1BA8MQ27 555 aa26.2■■□□□ 1.78
MAP1LC3A-201ENST00000360668 NBPF7P0C2Y1 421 aaPredicted RBP26.2■■□□□ 1.78
MAP1LC3A-201ENST00000360668 RGS3P49796 1198 aa26.2■■□□□ 1.78
MAP1LC3A-201ENST00000360668 ATP8B2P98198 1209 aa26.2■■□□□ 1.78
MAP1LC3A-201ENST00000360668 GRM8O00222 908 aa26.18■■□□□ 1.78
MAP1LC3A-201ENST00000360668 ATP6V1AP38606 617 aa26.18■■□□□ 1.78
MAP1LC3A-201ENST00000360668 RREB1Q92766 1687 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 GCKRQ14397 625 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 BTAF1O14981 1849 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 AFDNP55196 1824 aaKnown RBP26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 SBF2Q86WG5 1849 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 FAM196AQ6ZSG2 479 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 CHD1LQ86WJ1 897 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 ZBTB1Q9Y2K1 713 aa26.16■■□□□ 1.78
MAP1LC3A-201ENST00000360668 IL6STP40189 918 aaPredicted RBP26.15■■□□□ 1.78
MAP1LC3A-201ENST00000360668 SF3B2Q13435 895 aaKnown RBP26.15■■□□□ 1.78
MAP1LC3A-201ENST00000360668 KIF6Q6ZMV9 814 aa26.15■■□□□ 1.78
MAP1LC3A-201ENST00000360668 ANKRD45Q5TZF3 282 aa26.14■■□□□ 1.78
MAP1LC3A-201ENST00000360668 ITPK1Q13572 414 aa26.13■■□□□ 1.77
MAP1LC3A-201ENST00000360668 ZBTB3Q9H5J0 574 aa26.13■■□□□ 1.77
MAP1LC3A-201ENST00000360668 CCDC87Q9NVE4 849 aa26.13■■□□□ 1.77
MAP1LC3A-201ENST00000360668 COL5A3P25940 1745 aaPredicted RBP26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 PNMA6EA0A0J9YXQ4 647 aa26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 DEFB132Q7Z7B7 95 aa26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 SSH3Q8TE77 659 aa26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 MTX1Q13505 466 aa26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 INTS5Q6P9B9 1019 aaKnown RBP26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 ZNF330Q9Y3S2 320 aaPredicted RBP26.12■■□□□ 1.77
MAP1LC3A-201ENST00000360668 MAP3K15Q6ZN16 1313 aa26.11■■□□□ 1.77
MAP1LC3A-201ENST00000360668 PDE4AP27815 886 aa26.11■■□□□ 1.77
MAP1LC3A-201ENST00000360668 CRKLP46109 303 aaKnown RBP26.11■■□□□ 1.77
MAP1LC3A-201ENST00000360668 PTF1AQ7RTS3 328 aa26.11■■□□□ 1.77
MAP1LC3A-201ENST00000360668 COL15A1P39059 1388 aa26.1■■□□□ 1.77
MAP1LC3A-201ENST00000360668 ATP5J2-PTCD1G3V325 749 aa26.1■■□□□ 1.77
MAP1LC3A-201ENST00000360668 POLA2Q14181 598 aa26.1■■□□□ 1.77
MAP1LC3A-201ENST00000360668 PPP1R42Q7Z4L9 355 aa26.1■■□□□ 1.77
MAP1LC3A-201ENST00000360668 LNPKQ9C0E8 428 aa26.1■■□□□ 1.77
MAP1LC3A-201ENST00000360668 CCDC191Q8NCU4 936 aa26.09■■□□□ 1.77
MAP1LC3A-201ENST00000360668 EIF5P55010 431 aaKnown RBP26.08■■□□□ 1.77
MAP1LC3A-201ENST00000360668 TCIRG1Q13488 830 aa26.08■■□□□ 1.77
MAP1LC3A-201ENST00000360668 NPM2Q86SE8 214 aaKnown RBP26.08■■□□□ 1.77
MAP1LC3A-201ENST00000360668 SUCLG2Q96I99 432 aa26.08■■□□□ 1.77
MAP1LC3A-201ENST00000360668 CWC25Q9NXE8 425 aaPredicted RBP26.08■■□□□ 1.77
MAP1LC3A-201ENST00000360668 TRIM37O94972 964 aa26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 TRIM28Q13263 835 aaKnown RBP26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 ISCA1Q9BUE6 129 aa26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 BCL11BQ9C0K0 894 aaPredicted RBP26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 ERVV-1B6SEH8 477 aa26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 SRGAP3O43295 1099 aa26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 GIGYF2Q6Y7W6 1299 aaKnown RBP26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 ZBTB47Q9UFB7 747 aaPredicted RBP26.07■■□□□ 1.76
MAP1LC3A-201ENST00000360668 MYH14Q7Z406 1995 aaKnown RBP26.06■■□□□ 1.76
MAP1LC3A-201ENST00000360668 A0A087WZG4 1122 aa26.06■■□□□ 1.76
MAP1LC3A-201ENST00000360668 HSP90AB3PQ58FF7 597 aa26.06■■□□□ 1.76
MAP1LC3A-201ENST00000360668 KAZALD1Q96I82 304 aa26.06■■□□□ 1.76
MAP1LC3A-201ENST00000360668 LY75O60449 1722 aa26.06■■□□□ 1.76
MAP1LC3A-201ENST00000360668 H7C1W4 665 aa26.05■■□□□ 1.76
MAP1LC3A-201ENST00000360668 BAG6P46379 1132 aa26.05■■□□□ 1.76
MAP1LC3A-201ENST00000360668 CASP7P55210 303 aa26.04■■□□□ 1.76
MAP1LC3A-201ENST00000360668 DZIP3Q86Y13 1208 aaKnown RBP26.04■■□□□ 1.76
MAP1LC3A-201ENST00000360668 CNTNAP4Q9C0A0 1308 aa26.04■■□□□ 1.76
MAP1LC3A-201ENST00000360668 UBE3BQ7Z3V4 1068 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 LINC00116Q8NCU8 138 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 BACH2Q9BYV9 841 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 BICC1Q9H694 974 aaKnown RBP26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 ANKRD36CQ5JPF3 1778 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 FAM161AQ3B820 660 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 ARXQ96QS3 562 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 EXOC6BQ9Y2D4 811 aa26.03■■□□□ 1.76
MAP1LC3A-201ENST00000360668 RAB11FIP3O75154 756 aa26.01■■□□□ 1.75
MAP1LC3A-201ENST00000360668 EN1Q05925 392 aaPredicted RBP26.01■■□□□ 1.75
MAP1LC3A-201ENST00000360668 HLFQ16534 295 aa26.01■■□□□ 1.75
MAP1LC3A-201ENST00000360668 RC3H1Q5TC82 1133 aaKnown RBP26.01■■□□□ 1.75
MAP1LC3A-201ENST00000360668 NUP98P52948 1817 aa26■■□□□ 1.75
MAP1LC3A-201ENST00000360668 HSP90AB4PQ58FF6 505 aa26■■□□□ 1.75
MAP1LC3A-201ENST00000360668 CCNL1Q9UK58 526 aaPredicted RBP26■■□□□ 1.75
MAP1LC3A-201ENST00000360668 NOP58Q9Y2X3 529 aaKnown RBP26■■□□□ 1.75
MAP1LC3A-201ENST00000360668 RABL6Q3YEC7 729 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms